Hb_140902_010

Information

Type -
Description -
Location Contig140902: 6-437
Sequence    

Annotation

kegg
ID brp:103848430
description DNA-binding protein HEXBP-like
nr
ID XP_012487759.1
description PREDICTED: uncharacterized protein LOC105800955 [Gossypium raimondii]
swissprot
ID -
description -
trembl
ID A0A067LNH1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13470 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_140902_010 0.0 - - PREDICTED: uncharacterized protein LOC105800955 [Gossypium raimondii]
2 Hb_002739_030 0.249645288 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HDG11 isoform X2 [Cucumis sativus]
3 Hb_002835_430 0.3121909752 - - Alliin lyase precursor, putative [Ricinus communis]
4 Hb_000649_100 0.330927684 - - unnamed protein product [Vitis vinifera]
5 Hb_014613_010 0.3389312225 - - PREDICTED: uncharacterized protein LOC105634374 [Jatropha curcas]
6 Hb_000802_110 0.3603465479 - - hypothetical protein POPTR_0004s20690g [Populus trichocarpa]
7 Hb_001123_240 0.3690691122 - - JAZ10 [Hevea brasiliensis]
8 Hb_004052_010 0.3751393121 - - PREDICTED: ninja-family protein AFP3-like isoform X2 [Jatropha curcas]
9 Hb_044653_080 0.3795610459 - - Uncharacterized protein TCM_045144 [Theobroma cacao]
10 Hb_042778_010 0.3858734565 - - -
11 Hb_002007_010 0.3894244865 - - PREDICTED: mediator of RNA polymerase II transcription subunit 37a [Jatropha curcas]
12 Hb_000077_060 0.3914460243 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH36-like [Jatropha curcas]
13 Hb_036790_020 0.3941452543 - - PREDICTED: polyadenylate-binding protein 3 [Jatropha curcas]
14 Hb_000220_030 0.3957575662 - - PREDICTED: amino-acid permease BAT1 homolog isoform X2 [Jatropha curcas]
15 Hb_000676_340 0.3963864226 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
16 Hb_007305_030 0.3977163352 - - serine-threonine protein kinase, putative [Ricinus communis]
17 Hb_000920_370 0.3977673791 - - hypothetical protein JCGZ_24527 [Jatropha curcas]
18 Hb_001486_010 0.3978033825 - - adenylsulfate kinase, putative [Ricinus communis]
19 Hb_001671_050 0.3999666122 - - ccd1, putative [Ricinus communis]
20 Hb_000211_030 0.4016174237 - - sugar transporter, putative [Ricinus communis]

Gene co-expression network

sample Hb_140902_010 Hb_140902_010 Hb_002739_030 Hb_002739_030 Hb_140902_010--Hb_002739_030 Hb_002835_430 Hb_002835_430 Hb_140902_010--Hb_002835_430 Hb_000649_100 Hb_000649_100 Hb_140902_010--Hb_000649_100 Hb_014613_010 Hb_014613_010 Hb_140902_010--Hb_014613_010 Hb_000802_110 Hb_000802_110 Hb_140902_010--Hb_000802_110 Hb_001123_240 Hb_001123_240 Hb_140902_010--Hb_001123_240 Hb_002739_030--Hb_001123_240 Hb_002739_030--Hb_002835_430 Hb_002897_100 Hb_002897_100 Hb_002739_030--Hb_002897_100 Hb_000220_030 Hb_000220_030 Hb_002739_030--Hb_000220_030 Hb_032717_070 Hb_032717_070 Hb_002739_030--Hb_032717_070 Hb_002835_430--Hb_001123_240 Hb_000788_060 Hb_000788_060 Hb_002835_430--Hb_000788_060 Hb_005306_010 Hb_005306_010 Hb_002835_430--Hb_005306_010 Hb_000042_220 Hb_000042_220 Hb_002835_430--Hb_000042_220 Hb_006907_080 Hb_006907_080 Hb_002835_430--Hb_006907_080 Hb_001242_050 Hb_001242_050 Hb_002835_430--Hb_001242_050 Hb_009732_030 Hb_009732_030 Hb_000649_100--Hb_009732_030 Hb_001208_010 Hb_001208_010 Hb_000649_100--Hb_001208_010 Hb_000649_100--Hb_002835_430 Hb_000920_370 Hb_000920_370 Hb_000649_100--Hb_000920_370 Hb_002228_060 Hb_002228_060 Hb_000649_100--Hb_002228_060 Hb_014613_010--Hb_000802_110 Hb_000343_180 Hb_000343_180 Hb_014613_010--Hb_000343_180 Hb_002686_120 Hb_002686_120 Hb_014613_010--Hb_002686_120 Hb_000260_290 Hb_000260_290 Hb_014613_010--Hb_000260_290 Hb_002035_110 Hb_002035_110 Hb_014613_010--Hb_002035_110 Hb_000676_270 Hb_000676_270 Hb_014613_010--Hb_000676_270 Hb_000802_110--Hb_000343_180 Hb_168707_040 Hb_168707_040 Hb_000802_110--Hb_168707_040 Hb_000672_150 Hb_000672_150 Hb_000802_110--Hb_000672_150 Hb_000802_110--Hb_002686_120 Hb_001894_090 Hb_001894_090 Hb_000802_110--Hb_001894_090 Hb_001123_240--Hb_000788_060 Hb_075247_010 Hb_075247_010 Hb_001123_240--Hb_075247_010 Hb_004162_060 Hb_004162_060 Hb_001123_240--Hb_004162_060 Hb_004453_070 Hb_004453_070 Hb_001123_240--Hb_004453_070 Hb_023344_070 Hb_023344_070 Hb_001123_240--Hb_023344_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.204181 0.179323 0.117413 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.345289 0 0.443869 0.0573503 0

CAGE analysis