Hb_141296_010

Information

Type -
Description -
Location Contig141296: 191-610
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_141296_010 0.0 - - -
2 Hb_060458_010 0.1702009413 - - conserved hypothetical protein [Ricinus communis]
3 Hb_000098_300 0.1717974428 - - -
4 Hb_138462_010 0.1868421197 - - PREDICTED: SUMO-conjugating enzyme UBC9-A-like isoform X1 [Elaeis guineensis]
5 Hb_060391_010 0.2145522926 - - nucleic acid binding protein, putative [Ricinus communis]
6 Hb_007333_040 0.2246161918 - - PREDICTED: proline-rich receptor-like protein kinase PERK1-like [Glycine max]
7 Hb_006960_010 0.2257007446 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000679_200 0.2296525657 - - EIN3-binding F box protein 1 [Theobroma cacao]
9 Hb_148131_010 0.2314879298 - - PREDICTED: ribosome biogenesis protein WDR12-like, partial [Jatropha curcas]
10 Hb_009119_020 0.2355899045 - - hypothetical protein CISIN_1g033708mg [Citrus sinensis]
11 Hb_006422_030 0.2361228805 - - -
12 Hb_005271_230 0.2421099119 - - PREDICTED: uncharacterized protein LOC105645849 isoform X4 [Jatropha curcas]
13 Hb_000082_020 0.2424934094 - - -
14 Hb_011206_020 0.2457323362 - - -
15 Hb_000928_050 0.2473857515 - - PREDICTED: DNA polymerase delta subunit 4 [Jatropha curcas]
16 Hb_033385_010 0.2479913011 - - hypothetical protein JCGZ_06094 [Jatropha curcas]
17 Hb_005318_020 0.2487100368 - - PREDICTED: lecithin-cholesterol acyltransferase-like 4 isoform X3 [Jatropha curcas]
18 Hb_010534_050 0.2498305372 - - PREDICTED: 40S ribosomal protein S7 [Jatropha curcas]
19 Hb_051437_010 0.2532842566 - - PREDICTED: calmodulin-interacting protein 111 isoform X2 [Jatropha curcas]
20 Hb_001050_060 0.2604093957 - - hypothetical protein POPTR_0011s036602g, partial [Populus trichocarpa]

Gene co-expression network

sample Hb_141296_010 Hb_141296_010 Hb_060458_010 Hb_060458_010 Hb_141296_010--Hb_060458_010 Hb_000098_300 Hb_000098_300 Hb_141296_010--Hb_000098_300 Hb_138462_010 Hb_138462_010 Hb_141296_010--Hb_138462_010 Hb_060391_010 Hb_060391_010 Hb_141296_010--Hb_060391_010 Hb_007333_040 Hb_007333_040 Hb_141296_010--Hb_007333_040 Hb_006960_010 Hb_006960_010 Hb_141296_010--Hb_006960_010 Hb_002126_020 Hb_002126_020 Hb_060458_010--Hb_002126_020 Hb_006422_030 Hb_006422_030 Hb_060458_010--Hb_006422_030 Hb_000082_020 Hb_000082_020 Hb_060458_010--Hb_000082_020 Hb_005318_020 Hb_005318_020 Hb_060458_010--Hb_005318_020 Hb_114079_010 Hb_114079_010 Hb_060458_010--Hb_114079_010 Hb_000679_200 Hb_000679_200 Hb_000098_300--Hb_000679_200 Hb_022891_010 Hb_022891_010 Hb_000098_300--Hb_022891_010 Hb_000098_300--Hb_007333_040 Hb_000098_300--Hb_060391_010 Hb_033385_010 Hb_033385_010 Hb_000098_300--Hb_033385_010 Hb_002611_030 Hb_002611_030 Hb_138462_010--Hb_002611_030 Hb_017014_010 Hb_017014_010 Hb_138462_010--Hb_017014_010 Hb_138462_010--Hb_060458_010 Hb_001711_050 Hb_001711_050 Hb_138462_010--Hb_001711_050 Hb_007527_070 Hb_007527_070 Hb_138462_010--Hb_007527_070 Hb_102591_010 Hb_102591_010 Hb_060391_010--Hb_102591_010 Hb_165402_010 Hb_165402_010 Hb_060391_010--Hb_165402_010 Hb_050034_010 Hb_050034_010 Hb_060391_010--Hb_050034_010 Hb_060391_010--Hb_000679_200 Hb_007456_020 Hb_007456_020 Hb_060391_010--Hb_007456_020 Hb_000366_020 Hb_000366_020 Hb_060391_010--Hb_000366_020 Hb_007333_040--Hb_033385_010 Hb_106415_010 Hb_106415_010 Hb_007333_040--Hb_106415_010 Hb_009119_020 Hb_009119_020 Hb_007333_040--Hb_009119_020 Hb_054586_020 Hb_054586_020 Hb_007333_040--Hb_054586_020 Hb_181328_010 Hb_181328_010 Hb_007333_040--Hb_181328_010 Hb_019053_010 Hb_019053_010 Hb_007333_040--Hb_019053_010 Hb_000928_050 Hb_000928_050 Hb_006960_010--Hb_000928_050 Hb_006960_010--Hb_009119_020 Hb_004244_010 Hb_004244_010 Hb_006960_010--Hb_004244_010 Hb_012490_100 Hb_012490_100 Hb_006960_010--Hb_012490_100 Hb_006960_010--Hb_138462_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.07602 7.56935 5.77005 37.4395 5.15123 65.0959
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 8.94799 23.3499 7.13174

CAGE analysis