Hb_141990_050

Information

Type transcription factor
Description TF Family: WRKY
Location Contig141990: 51856-54414
Sequence    

Annotation

kegg
ID rcu:RCOM_0849600
description transcription factor, putative
nr
ID XP_012089749.1
description PREDICTED: probable WRKY transcription factor 33 [Jatropha curcas]
swissprot
ID Q8S8P5
description Probable WRKY transcription factor 33 OS=Arabidopsis thaliana GN=WRKY33 PE=1 SV=2
trembl
ID M9TNQ5
description Uncharacterized protein OS=Jatropha curcas GN=WRKY08 PE=4 SV=1
Gene Ontology
ID GO:0003700
description probable wrky transcription factor 33

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_141990_050 0.0 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 33 [Jatropha curcas]
2 Hb_007328_010 0.0813470364 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Fragaria vesca subsp. vesca]
3 Hb_000522_120 0.0897809906 - - hypothetical protein POPTR_0008s16470g [Populus trichocarpa]
4 Hb_009189_010 0.1126916791 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 33 [Jatropha curcas]
5 Hb_002849_030 0.1206303456 transcription factor TF Family: WRKY hypothetical protein POPTR_0014s09190g [Populus trichocarpa]
6 Hb_073870_020 0.122006045 - - PREDICTED: probable receptor-like protein kinase At1g67000, partial [Jatropha curcas]
7 Hb_005588_010 0.1387096022 - - PREDICTED: patatin-like protein 2 [Jatropha curcas]
8 Hb_001677_130 0.1389696001 - - hypothetical protein POPTR_0081s002101g, partial [Populus trichocarpa]
9 Hb_000175_250 0.1423004434 - - PREDICTED: cucumber peeling cupredoxin-like [Jatropha curcas]
10 Hb_008897_020 0.1442188556 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 [Musa acuminata subsp. malaccensis]
11 Hb_027214_060 0.1447318861 - - PREDICTED: exocyst complex component EXO70A1-like [Jatropha curcas]
12 Hb_031862_150 0.1451747634 - - PREDICTED: mitochondrial uncoupling protein 5 [Jatropha curcas]
13 Hb_000117_110 0.1456407667 - - transferase, putative [Ricinus communis]
14 Hb_055706_010 0.1461424627 - - hypothetical protein JCGZ_22222 [Jatropha curcas]
15 Hb_000347_360 0.1464936154 - - PREDICTED: linoleate 13S-lipoxygenase 3-1, chloroplastic [Jatropha curcas]
16 Hb_001568_060 0.146609452 - - PREDICTED: uncharacterized protein LOC105650728 [Jatropha curcas]
17 Hb_039650_030 0.1492593534 - - hypothetical protein RCOM_2128750 [Ricinus communis]
18 Hb_091913_010 0.1497343762 - - PREDICTED: disease resistance protein RPM1 [Jatropha curcas]
19 Hb_000297_100 0.1499275527 transcription factor TF Family: NAC NAC transcription factor 038 [Jatropha curcas]
20 Hb_009247_020 0.1505969497 - - hypothetical protein JCGZ_04985 [Jatropha curcas]

Gene co-expression network

sample Hb_141990_050 Hb_141990_050 Hb_007328_010 Hb_007328_010 Hb_141990_050--Hb_007328_010 Hb_000522_120 Hb_000522_120 Hb_141990_050--Hb_000522_120 Hb_009189_010 Hb_009189_010 Hb_141990_050--Hb_009189_010 Hb_002849_030 Hb_002849_030 Hb_141990_050--Hb_002849_030 Hb_073870_020 Hb_073870_020 Hb_141990_050--Hb_073870_020 Hb_005588_010 Hb_005588_010 Hb_141990_050--Hb_005588_010 Hb_007328_010--Hb_009189_010 Hb_007328_010--Hb_000522_120 Hb_001677_130 Hb_001677_130 Hb_007328_010--Hb_001677_130 Hb_007328_010--Hb_002849_030 Hb_007328_010--Hb_073870_020 Hb_031862_150 Hb_031862_150 Hb_000522_120--Hb_031862_150 Hb_005643_020 Hb_005643_020 Hb_000522_120--Hb_005643_020 Hb_000522_120--Hb_005588_010 Hb_022768_010 Hb_022768_010 Hb_000522_120--Hb_022768_010 Hb_001411_150 Hb_001411_150 Hb_009189_010--Hb_001411_150 Hb_009189_010--Hb_073870_020 Hb_007383_050 Hb_007383_050 Hb_009189_010--Hb_007383_050 Hb_009189_010--Hb_002849_030 Hb_000347_360 Hb_000347_360 Hb_009189_010--Hb_000347_360 Hb_001289_030 Hb_001289_030 Hb_009189_010--Hb_001289_030 Hb_002849_030--Hb_000347_360 Hb_002849_030--Hb_073870_020 Hb_000322_020 Hb_000322_020 Hb_002849_030--Hb_000322_020 Hb_000422_050 Hb_000422_050 Hb_002849_030--Hb_000422_050 Hb_048538_010 Hb_048538_010 Hb_002849_030--Hb_048538_010 Hb_073870_020--Hb_000347_360 Hb_027214_060 Hb_027214_060 Hb_073870_020--Hb_027214_060 Hb_000227_410 Hb_000227_410 Hb_073870_020--Hb_000227_410 Hb_073870_020--Hb_048538_010 Hb_005588_010--Hb_005643_020 Hb_001405_260 Hb_001405_260 Hb_005588_010--Hb_001405_260 Hb_005648_030 Hb_005648_030 Hb_005588_010--Hb_005648_030 Hb_033153_010 Hb_033153_010 Hb_005588_010--Hb_033153_010 Hb_022630_010 Hb_022630_010 Hb_005588_010--Hb_022630_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 13.5153 1.70788 0.927052 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.12353 0.136072 0.0367775 0.325077 0.819566

CAGE analysis