Hb_142026_010

Information

Type -
Description -
Location Contig142026: 222-1061
Sequence    

Annotation

kegg
ID rcu:RCOM_0366700
description alcohol dehydrogenase, putative (EC:1.1.1.255)
nr
ID XP_012081658.1
description PREDICTED: probable mannitol dehydrogenase [Jatropha curcas]
swissprot
ID Q9ZRF1
description Probable mannitol dehydrogenase OS=Fragaria ananassa GN=CAD PE=2 SV=1
trembl
ID A0A067KBZ8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18695 PE=3 SV=1
Gene Ontology
ID GO:0008270
description probable mannitol dehydrogenase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_142026_010 0.0 - - PREDICTED: probable mannitol dehydrogenase [Jatropha curcas]
2 Hb_002205_150 0.0580645685 - - RING-H2 finger protein ATL3C, putative [Ricinus communis]
3 Hb_002902_040 0.0679532547 - - PREDICTED: peroxidase 51 [Jatropha curcas]
4 Hb_019496_040 0.073528134 - - kinase family protein [Populus trichocarpa]
5 Hb_106089_010 0.0758110759 - - PREDICTED: cytochrome P450 CYP82D47-like [Jatropha curcas]
6 Hb_003454_050 0.0784372839 - - PREDICTED: probable methyltransferase PMT14 [Jatropha curcas]
7 Hb_000163_180 0.0821042723 - - PREDICTED: UDP-glucuronic acid decarboxylase 2 [Jatropha curcas]
8 Hb_004634_030 0.0877732284 - - conserved hypothetical protein [Ricinus communis]
9 Hb_002151_020 0.0902961299 - - PREDICTED: uncharacterized protein LOC105637945 [Jatropha curcas]
10 Hb_030982_050 0.0906654192 - - PREDICTED: gamma-glutamyl hydrolase 2-like [Jatropha curcas]
11 Hb_004228_070 0.0912302046 - - PREDICTED: uncharacterized protein LOC103338699 [Prunus mume]
12 Hb_012539_100 0.0930243538 - - PREDICTED: putative proline-rich receptor-like protein kinase PERK11 [Jatropha curcas]
13 Hb_003092_020 0.0937480506 - - PREDICTED: heptahelical transmembrane protein 1 [Jatropha curcas]
14 Hb_007894_120 0.1040915633 - - PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase-like isoform X1 [Jatropha curcas]
15 Hb_000342_020 0.1078451209 - - bel1 homeotic protein, putative [Ricinus communis]
16 Hb_000365_180 0.112492605 - - PREDICTED: protein LURP-one-related 8-like [Pyrus x bretschneideri]
17 Hb_012787_060 0.1125909401 - - PREDICTED: glutathione S-transferase U17-like [Prunus mume]
18 Hb_144703_010 0.1164482791 - - Phospholipase A 2A, IIA,PLA2A [Theobroma cacao]
19 Hb_028928_020 0.1175175434 - - hypothetical protein CICLE_v10018504mg [Citrus clementina]
20 Hb_007221_040 0.1183864395 - - PREDICTED: probable receptor-like protein kinase At5g24010 isoform X2 [Populus euphratica]

Gene co-expression network

sample Hb_142026_010 Hb_142026_010 Hb_002205_150 Hb_002205_150 Hb_142026_010--Hb_002205_150 Hb_002902_040 Hb_002902_040 Hb_142026_010--Hb_002902_040 Hb_019496_040 Hb_019496_040 Hb_142026_010--Hb_019496_040 Hb_106089_010 Hb_106089_010 Hb_142026_010--Hb_106089_010 Hb_003454_050 Hb_003454_050 Hb_142026_010--Hb_003454_050 Hb_000163_180 Hb_000163_180 Hb_142026_010--Hb_000163_180 Hb_012539_100 Hb_012539_100 Hb_002205_150--Hb_012539_100 Hb_004228_070 Hb_004228_070 Hb_002205_150--Hb_004228_070 Hb_002205_150--Hb_003454_050 Hb_002205_150--Hb_002902_040 Hb_004634_030 Hb_004634_030 Hb_002205_150--Hb_004634_030 Hb_002151_020 Hb_002151_020 Hb_002902_040--Hb_002151_020 Hb_002902_040--Hb_019496_040 Hb_000342_020 Hb_000342_020 Hb_002902_040--Hb_000342_020 Hb_144703_010 Hb_144703_010 Hb_002902_040--Hb_144703_010 Hb_019496_040--Hb_144703_010 Hb_000069_540 Hb_000069_540 Hb_019496_040--Hb_000069_540 Hb_019496_040--Hb_002151_020 Hb_019496_040--Hb_000342_020 Hb_106089_010--Hb_003454_050 Hb_106089_010--Hb_002205_150 Hb_030982_050 Hb_030982_050 Hb_106089_010--Hb_030982_050 Hb_106089_010--Hb_002902_040 Hb_006970_170 Hb_006970_170 Hb_106089_010--Hb_006970_170 Hb_003454_050--Hb_004228_070 Hb_003454_050--Hb_002902_040 Hb_026240_020 Hb_026240_020 Hb_003454_050--Hb_026240_020 Hb_000365_180 Hb_000365_180 Hb_000163_180--Hb_000365_180 Hb_008749_010 Hb_008749_010 Hb_000163_180--Hb_008749_010 Hb_000163_180--Hb_030982_050 Hb_003092_020 Hb_003092_020 Hb_000163_180--Hb_003092_020 Hb_000163_180--Hb_106089_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.473177 0.567301 0.710644 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.240529 0.430314

CAGE analysis