Hb_142295_010

Information

Type -
Description -
Location Contig142295: 19-494
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_142295_010 0.0 - - -
2 Hb_165085_010 0.0036212004 - - hypothetical protein JCGZ_19461 [Jatropha curcas]
3 Hb_092416_010 0.0060522923 - - PREDICTED: uncharacterized protein LOC105638802 [Jatropha curcas]
4 Hb_002686_370 0.006543392 - - PREDICTED: uncharacterized protein LOC102628436 [Citrus sinensis]
5 Hb_000463_110 0.0067736904 - - -
6 Hb_002260_230 0.0148312776 - - hypothetical protein SORBIDRAFT_05g006180 [Sorghum bicolor]
7 Hb_001998_040 0.0153458355 - - ATP binding protein, putative [Ricinus communis]
8 Hb_002641_150 0.0164207383 - - PREDICTED: stachyose synthase-like [Citrus sinensis]
9 Hb_001792_010 0.0171837445 - - Uncharacterized protein TCM_043787 [Theobroma cacao]
10 Hb_000589_430 0.04034212 - - hypothetical protein JCGZ_01402 [Jatropha curcas]
11 Hb_000483_170 0.0527468545 transcription factor TF Family: NAC PREDICTED: protein FEZ [Jatropha curcas]
12 Hb_004246_010 0.0565272182 - - -
13 Hb_001274_010 0.0770177384 - - -
14 Hb_157349_010 0.0859116048 - - PREDICTED: uncharacterized protein LOC102588546 [Solanum tuberosum]
15 Hb_007586_020 0.1100404867 - - hypothetical protein PRUPE_ppa022673mg [Prunus persica]
16 Hb_004888_050 0.1116439819 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
17 Hb_000608_070 0.1128170149 - - -
18 Hb_000085_110 0.1483094313 - - hypothetical protein JCGZ_00957 [Jatropha curcas]
19 Hb_000245_240 0.1492387862 - - -
20 Hb_088224_010 0.1504717948 - - PREDICTED: uncharacterized protein LOC105796032 [Gossypium raimondii]

Gene co-expression network

sample Hb_142295_010 Hb_142295_010 Hb_165085_010 Hb_165085_010 Hb_142295_010--Hb_165085_010 Hb_092416_010 Hb_092416_010 Hb_142295_010--Hb_092416_010 Hb_002686_370 Hb_002686_370 Hb_142295_010--Hb_002686_370 Hb_000463_110 Hb_000463_110 Hb_142295_010--Hb_000463_110 Hb_002260_230 Hb_002260_230 Hb_142295_010--Hb_002260_230 Hb_001998_040 Hb_001998_040 Hb_142295_010--Hb_001998_040 Hb_165085_010--Hb_092416_010 Hb_165085_010--Hb_002686_370 Hb_165085_010--Hb_000463_110 Hb_165085_010--Hb_002260_230 Hb_165085_010--Hb_001998_040 Hb_092416_010--Hb_002686_370 Hb_092416_010--Hb_000463_110 Hb_092416_010--Hb_002260_230 Hb_092416_010--Hb_001998_040 Hb_002686_370--Hb_000463_110 Hb_002686_370--Hb_002260_230 Hb_002686_370--Hb_001998_040 Hb_002641_150 Hb_002641_150 Hb_002686_370--Hb_002641_150 Hb_000463_110--Hb_002260_230 Hb_000463_110--Hb_001998_040 Hb_000463_110--Hb_002641_150 Hb_002260_230--Hb_001998_040 Hb_002260_230--Hb_002641_150 Hb_001792_010 Hb_001792_010 Hb_002260_230--Hb_001792_010 Hb_001998_040--Hb_002641_150 Hb_001998_040--Hb_001792_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 0.0793067
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0696477 0

CAGE analysis