Hb_142321_010

Information

Type -
Description -
Location Contig142321: 1587-5652
Sequence    

Annotation

kegg
ID rcu:RCOM_1533790
description hypothetical protein
nr
ID XP_012072846.1
description PREDICTED: uncharacterized protein LOC105634581 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L0D8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05998 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_142321_010 0.0 - - PREDICTED: uncharacterized protein LOC105634581 [Jatropha curcas]
2 Hb_001235_150 0.0952775997 - - PREDICTED: chaperone protein dnaJ 13 isoform X1 [Jatropha curcas]
3 Hb_012779_090 0.0981461732 - - PREDICTED: lipase member N [Jatropha curcas]
4 Hb_001862_210 0.0984365979 - - PREDICTED: LOW QUALITY PROTEIN: salutaridine reductase-like [Citrus sinensis]
5 Hb_001279_170 0.1010700201 - - PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial [Jatropha curcas]
6 Hb_001723_020 0.1011467591 - - PREDICTED: nuclear export mediator factor Nemf [Jatropha curcas]
7 Hb_162275_050 0.1019567611 - - PREDICTED: mRNA-capping enzyme [Jatropha curcas]
8 Hb_000363_400 0.1114590726 - - PREDICTED: protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 [Jatropha curcas]
9 Hb_003464_090 0.1115554067 transcription factor TF Family: Trihelix PREDICTED: uncharacterized protein LOC105642342 [Jatropha curcas]
10 Hb_001006_330 0.1145872036 - - sodium/hydrogen exchanger plant, putative [Ricinus communis]
11 Hb_006588_210 0.1146257651 - - PREDICTED: E3 ubiquitin-protein ligase Hakai [Jatropha curcas]
12 Hb_000922_360 0.1147180014 - - -
13 Hb_005137_050 0.114966794 - - PREDICTED: nuclear pore complex protein NUP58 [Jatropha curcas]
14 Hb_000260_180 0.1152545377 - - PREDICTED: KH domain-containing protein At2g38610 [Jatropha curcas]
15 Hb_001410_020 0.1154469441 - - cdk8, putative [Ricinus communis]
16 Hb_077562_050 0.1162595039 transcription factor TF Family: NF-YC PREDICTED: dr1-associated corepressor homolog [Jatropha curcas]
17 Hb_000025_730 0.1163603604 - - PREDICTED: 60S ribosomal protein L2, mitochondrial [Jatropha curcas]
18 Hb_000340_400 0.1163958002 - - Histidine-containing phosphotransfer protein, putative [Ricinus communis]
19 Hb_002890_290 0.1168708576 - - PREDICTED: outer envelope protein 64, mitochondrial [Jatropha curcas]
20 Hb_005288_010 0.1173842352 - - ubiquitin-protein ligase, putative [Ricinus communis]

Gene co-expression network

sample Hb_142321_010 Hb_142321_010 Hb_001235_150 Hb_001235_150 Hb_142321_010--Hb_001235_150 Hb_012779_090 Hb_012779_090 Hb_142321_010--Hb_012779_090 Hb_001862_210 Hb_001862_210 Hb_142321_010--Hb_001862_210 Hb_001279_170 Hb_001279_170 Hb_142321_010--Hb_001279_170 Hb_001723_020 Hb_001723_020 Hb_142321_010--Hb_001723_020 Hb_162275_050 Hb_162275_050 Hb_142321_010--Hb_162275_050 Hb_000006_040 Hb_000006_040 Hb_001235_150--Hb_000006_040 Hb_033642_090 Hb_033642_090 Hb_001235_150--Hb_033642_090 Hb_004254_090 Hb_004254_090 Hb_001235_150--Hb_004254_090 Hb_001357_250 Hb_001357_250 Hb_001235_150--Hb_001357_250 Hb_000165_040 Hb_000165_040 Hb_001235_150--Hb_000165_040 Hb_000696_230 Hb_000696_230 Hb_001235_150--Hb_000696_230 Hb_012779_090--Hb_162275_050 Hb_002798_070 Hb_002798_070 Hb_012779_090--Hb_002798_070 Hb_000243_250 Hb_000243_250 Hb_012779_090--Hb_000243_250 Hb_012194_030 Hb_012194_030 Hb_012779_090--Hb_012194_030 Hb_000395_130 Hb_000395_130 Hb_012779_090--Hb_000395_130 Hb_001410_020 Hb_001410_020 Hb_012779_090--Hb_001410_020 Hb_001862_210--Hb_001723_020 Hb_002890_290 Hb_002890_290 Hb_001862_210--Hb_002890_290 Hb_000340_400 Hb_000340_400 Hb_001862_210--Hb_000340_400 Hb_142368_010 Hb_142368_010 Hb_001862_210--Hb_142368_010 Hb_004837_180 Hb_004837_180 Hb_001862_210--Hb_004837_180 Hb_000069_380 Hb_000069_380 Hb_001862_210--Hb_000069_380 Hb_000617_230 Hb_000617_230 Hb_001279_170--Hb_000617_230 Hb_001789_060 Hb_001789_060 Hb_001279_170--Hb_001789_060 Hb_000484_130 Hb_000484_130 Hb_001279_170--Hb_000484_130 Hb_000291_010 Hb_000291_010 Hb_001279_170--Hb_000291_010 Hb_001279_170--Hb_001862_210 Hb_002675_130 Hb_002675_130 Hb_001279_170--Hb_002675_130 Hb_007765_110 Hb_007765_110 Hb_001723_020--Hb_007765_110 Hb_001723_020--Hb_000340_400 Hb_007035_050 Hb_007035_050 Hb_001723_020--Hb_007035_050 Hb_003464_090 Hb_003464_090 Hb_001723_020--Hb_003464_090 Hb_001723_020--Hb_002890_290 Hb_162275_050--Hb_012194_030 Hb_000614_210 Hb_000614_210 Hb_162275_050--Hb_000614_210 Hb_162275_050--Hb_001410_020 Hb_003835_070 Hb_003835_070 Hb_162275_050--Hb_003835_070 Hb_162275_050--Hb_003464_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.59002 6.168 4.54313 1.79775 4.40098 1.95786
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.07722 5.51003 4.38483 4.9885 3.49382

CAGE analysis