Hb_142751_010

Information

Type -
Description -
Location Contig142751: 534-875
Sequence    

Annotation

kegg
ID rcu:RCOM_0193190
description hypothetical protein
nr
ID XP_002531792.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9T0M3
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0193190 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_142751_010 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_015354_010 0.1313394181 - - PREDICTED: B2 protein [Jatropha curcas]
3 Hb_000429_250 0.1323648115 - - hypothetical protein L484_000744 [Morus notabilis]
4 Hb_001623_300 0.1360130623 - - PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B [Jatropha curcas]
5 Hb_001767_120 0.1484383737 - - -
6 Hb_088428_010 0.1505133234 - - PREDICTED: E3 ubiquitin-protein ligase RNF181 homolog [Jatropha curcas]
7 Hb_001623_290 0.1534908709 - - unknown [Populus trichocarpa]
8 Hb_004935_080 0.159027193 - - AT3g13060/MGH6_17 [Arabidopsis thaliana]
9 Hb_003038_220 0.1609443959 - - eukaryotic translation initiation factor 2 gamma subunit, putative [Ricinus communis]
10 Hb_015026_060 0.161002348 - - PREDICTED: uncharacterized protein LOC105649473 [Jatropha curcas]
11 Hb_000606_080 0.1614318312 - - PREDICTED: RNA-binding protein Nova-2-like [Malus domestica]
12 Hb_126295_010 0.1636348947 - - PREDICTED: protein SEH1 [Jatropha curcas]
13 Hb_003925_070 0.1640146989 - - ATOZI1, putative [Ricinus communis]
14 Hb_121467_010 0.1650405444 - - tubulin-specific chaperone E, putative [Ricinus communis]
15 Hb_010565_010 0.1656513026 - - PREDICTED: N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase-like isoform X2 [Populus euphratica]
16 Hb_173178_020 0.1673877232 - - PREDICTED: vesicle transport v-SNARE 12-like isoform X1 [Jatropha curcas]
17 Hb_001752_040 0.1675037906 - - hypothetical protein EUGRSUZ_C02580 [Eucalyptus grandis]
18 Hb_001052_040 0.1678545284 - - Ferredoxin-3, chloroplast precursor, putative [Ricinus communis]
19 Hb_001040_120 0.1694186972 - - allantoinase, putative [Ricinus communis]
20 Hb_030328_010 0.1701187236 - - hypothetical protein CICLE_v10015936mg [Citrus clementina]

Gene co-expression network

sample Hb_142751_010 Hb_142751_010 Hb_015354_010 Hb_015354_010 Hb_142751_010--Hb_015354_010 Hb_000429_250 Hb_000429_250 Hb_142751_010--Hb_000429_250 Hb_001623_300 Hb_001623_300 Hb_142751_010--Hb_001623_300 Hb_001767_120 Hb_001767_120 Hb_142751_010--Hb_001767_120 Hb_088428_010 Hb_088428_010 Hb_142751_010--Hb_088428_010 Hb_001623_290 Hb_001623_290 Hb_142751_010--Hb_001623_290 Hb_001052_040 Hb_001052_040 Hb_015354_010--Hb_001052_040 Hb_003038_220 Hb_003038_220 Hb_015354_010--Hb_003038_220 Hb_173178_020 Hb_173178_020 Hb_015354_010--Hb_173178_020 Hb_000152_670 Hb_000152_670 Hb_015354_010--Hb_000152_670 Hb_002742_080 Hb_002742_080 Hb_015354_010--Hb_002742_080 Hb_000429_250--Hb_001623_300 Hb_000429_250--Hb_001623_290 Hb_112047_010 Hb_112047_010 Hb_000429_250--Hb_112047_010 Hb_128998_010 Hb_128998_010 Hb_000429_250--Hb_128998_010 Hb_000429_250--Hb_001767_120 Hb_001623_300--Hb_001623_290 Hb_006663_090 Hb_006663_090 Hb_001623_300--Hb_006663_090 Hb_010964_020 Hb_010964_020 Hb_001623_300--Hb_010964_020 Hb_106415_010 Hb_106415_010 Hb_001623_300--Hb_106415_010 Hb_005714_130 Hb_005714_130 Hb_001767_120--Hb_005714_130 Hb_001752_040 Hb_001752_040 Hb_001767_120--Hb_001752_040 Hb_002508_010 Hb_002508_010 Hb_001767_120--Hb_002508_010 Hb_001767_120--Hb_128998_010 Hb_121467_010 Hb_121467_010 Hb_001767_120--Hb_121467_010 Hb_171788_010 Hb_171788_010 Hb_001767_120--Hb_171788_010 Hb_088428_010--Hb_121467_010 Hb_178041_010 Hb_178041_010 Hb_088428_010--Hb_178041_010 Hb_130134_030 Hb_130134_030 Hb_088428_010--Hb_130134_030 Hb_009119_030 Hb_009119_030 Hb_088428_010--Hb_009119_030 Hb_000486_060 Hb_000486_060 Hb_088428_010--Hb_000486_060 Hb_001623_290--Hb_112047_010 Hb_001623_290--Hb_010964_020 Hb_001623_290--Hb_006663_090 Hb_002687_080 Hb_002687_080 Hb_001623_290--Hb_002687_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
422.942 146.905 136.061 471.225 284.209 748.638
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
145.33 125.462 73.3504 64.0146 28.1208

CAGE analysis