Hb_143395_010

Information

Type -
Description -
Location Contig143395: 612-953
Sequence    

Annotation

kegg
ID rcu:RCOM_1355010
description acylphosphatase, putative
nr
ID XP_012082398.1
description PREDICTED: uncharacterized protein LOC105642243 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KA32
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16534 PE=3 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_11423: 651-955
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_143395_010 0.0 - - PREDICTED: uncharacterized protein LOC105642243 [Jatropha curcas]
2 Hb_001347_040 0.0634171738 - - PREDICTED: uncharacterized protein LOC105633920 [Jatropha curcas]
3 Hb_007416_300 0.0635313442 - - PREDICTED: COP9 signalosome complex subunit 5b-like [Jatropha curcas]
4 Hb_010381_090 0.0654047643 - - PREDICTED: protein FLX-like 3 [Jatropha curcas]
5 Hb_003124_220 0.0706022959 - - PREDICTED: coiled-coil domain-containing protein 93 [Jatropha curcas]
6 Hb_003964_070 0.0763154032 - - hypothetical protein JCGZ_15695 [Jatropha curcas]
7 Hb_131646_010 0.0771102279 - - protein arginine n-methyltransferase, putative [Ricinus communis]
8 Hb_002078_110 0.0782880851 - - PREDICTED: nuclear pore complex protein NUP54 [Jatropha curcas]
9 Hb_001051_080 0.0796385193 - - hypothetical protein EUGRSUZ_B02508 [Eucalyptus grandis]
10 Hb_003549_150 0.079837613 - - clathrin coat adaptor ap3 medium chain, putative [Ricinus communis]
11 Hb_010068_040 0.0836632001 - - PREDICTED: uncharacterized protein LOC105632964 [Jatropha curcas]
12 Hb_120410_010 0.0843373749 - - PREDICTED: vesicle-associated membrane protein 727-like [Solanum tuberosum]
13 Hb_000208_210 0.0854885815 - - PREDICTED: RNA-binding protein Nova-2 [Jatropha curcas]
14 Hb_008453_140 0.086728611 - - PREDICTED: SKP1-like protein 1B [Jatropha curcas]
15 Hb_007317_110 0.0880942056 - - PREDICTED: uncharacterized RNA-binding protein C660.15-like [Jatropha curcas]
16 Hb_004310_150 0.0882513532 - - PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein [Vitis vinifera]
17 Hb_002375_010 0.0882747199 - - PREDICTED: C2 and GRAM domain-containing protein At1g03370 isoform X1 [Jatropha curcas]
18 Hb_032920_060 0.0883426708 - - PREDICTED: mitotic checkpoint protein BUB3.1 [Jatropha curcas]
19 Hb_002783_170 0.0893268995 - - PREDICTED: BRCA1-A complex subunit BRE isoform X2 [Jatropha curcas]
20 Hb_000414_050 0.0897919953 - - hypothetical protein JCGZ_19588 [Jatropha curcas]

Gene co-expression network

sample Hb_143395_010 Hb_143395_010 Hb_001347_040 Hb_001347_040 Hb_143395_010--Hb_001347_040 Hb_007416_300 Hb_007416_300 Hb_143395_010--Hb_007416_300 Hb_010381_090 Hb_010381_090 Hb_143395_010--Hb_010381_090 Hb_003124_220 Hb_003124_220 Hb_143395_010--Hb_003124_220 Hb_003964_070 Hb_003964_070 Hb_143395_010--Hb_003964_070 Hb_131646_010 Hb_131646_010 Hb_143395_010--Hb_131646_010 Hb_001347_040--Hb_131646_010 Hb_001377_070 Hb_001377_070 Hb_001347_040--Hb_001377_070 Hb_001347_040--Hb_003124_220 Hb_000256_190 Hb_000256_190 Hb_001347_040--Hb_000256_190 Hb_002078_110 Hb_002078_110 Hb_001347_040--Hb_002078_110 Hb_007416_300--Hb_010381_090 Hb_001051_080 Hb_001051_080 Hb_007416_300--Hb_001051_080 Hb_002872_030 Hb_002872_030 Hb_007416_300--Hb_002872_030 Hb_003549_150 Hb_003549_150 Hb_007416_300--Hb_003549_150 Hb_033642_030 Hb_033642_030 Hb_007416_300--Hb_033642_030 Hb_008453_140 Hb_008453_140 Hb_007416_300--Hb_008453_140 Hb_010381_090--Hb_002872_030 Hb_010381_090--Hb_008453_140 Hb_120410_010 Hb_120410_010 Hb_010381_090--Hb_120410_010 Hb_001142_030 Hb_001142_030 Hb_010381_090--Hb_001142_030 Hb_010381_090--Hb_003549_150 Hb_000718_070 Hb_000718_070 Hb_003124_220--Hb_000718_070 Hb_003124_220--Hb_002078_110 Hb_003124_220--Hb_131646_010 Hb_003124_220--Hb_000256_190 Hb_003665_060 Hb_003665_060 Hb_003964_070--Hb_003665_060 Hb_007317_110 Hb_007317_110 Hb_003964_070--Hb_007317_110 Hb_000120_670 Hb_000120_670 Hb_003964_070--Hb_000120_670 Hb_001357_350 Hb_001357_350 Hb_003964_070--Hb_001357_350 Hb_000345_240 Hb_000345_240 Hb_003964_070--Hb_000345_240 Hb_003964_070--Hb_010381_090 Hb_002686_250 Hb_002686_250 Hb_131646_010--Hb_002686_250 Hb_004785_100 Hb_004785_100 Hb_131646_010--Hb_004785_100 Hb_002835_230 Hb_002835_230 Hb_131646_010--Hb_002835_230 Hb_003029_030 Hb_003029_030 Hb_131646_010--Hb_003029_030 Hb_131646_010--Hb_002078_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
27.1254 27.9425 37.9809 31.3359 48.1949 48.8755
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
25.2926 33.4961 26.4712 27.1498 15.3531

CAGE analysis