Hb_143766_040

Information

Type -
Description -
Location Contig143766: 33366-34953
Sequence    

Annotation

kegg
ID pmum:103340769
description probable caffeoyl-CoA O-methyltransferase At4g26220
nr
ID XP_012076799.1
description PREDICTED: probable caffeoyl-CoA O-methyltransferase At4g26220 [Jatropha curcas]
swissprot
ID Q9C5D7
description Probable caffeoyl-CoA O-methyltransferase At4g26220 OS=Arabidopsis thaliana GN=At4g26220 PE=2 SV=1
trembl
ID A0A067KPN2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07320 PE=4 SV=1
Gene Ontology
ID GO:0005829
description probable caffeoyl- o-methyltransferase at4g26220

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_11553: 33395-33878
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_143766_040 0.0 - - PREDICTED: probable caffeoyl-CoA O-methyltransferase At4g26220 [Jatropha curcas]
2 Hb_007337_010 0.0014520635 - - PREDICTED: putative receptor protein kinase ZmPK1 [Jatropha curcas]
3 Hb_004981_020 0.0029221789 - - PREDICTED: uncharacterized protein LOC103706119 [Phoenix dactylifera]
4 Hb_187247_010 0.0129493361 - - PREDICTED: cytochrome P450 86B1-like [Jatropha curcas]
5 Hb_061590_010 0.0257954867 - - hypothetical protein JCGZ_23475 [Jatropha curcas]
6 Hb_005726_030 0.0270785944 - - hypothetical protein CISIN_1g020511mg [Citrus sinensis]
7 Hb_126040_020 0.0381593368 - - -
8 Hb_000201_080 0.0431343409 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
9 Hb_001604_140 0.0478017019 - - PREDICTED: ABC transporter G family member 10-like [Populus euphratica]
10 Hb_106528_020 0.0503813529 - - Cationic peroxidase 2 precursor [Theobroma cacao]
11 Hb_003685_060 0.0506152461 - - PREDICTED: laccase-15 [Jatropha curcas]
12 Hb_000022_270 0.0531462574 - - conserved hypothetical protein [Ricinus communis]
13 Hb_038238_010 0.0594260245 - - hypothetical protein POPTR_0001s30980g [Populus trichocarpa]
14 Hb_007437_010 0.061452877 - - Polygalacturonase precursor, putative [Ricinus communis]
15 Hb_010358_010 0.0638018399 - - PREDICTED: cytochrome P450 CYP82D47-like [Jatropha curcas]
16 Hb_020141_020 0.067959245 - - -
17 Hb_001675_210 0.0684719413 - - PREDICTED: protein PLANT CADMIUM RESISTANCE 8-like [Jatropha curcas]
18 Hb_006415_020 0.0715191411 - - PREDICTED: nucleobase-ascorbate transporter 4-like [Jatropha curcas]
19 Hb_000828_030 0.073624072 - - PREDICTED: secoisolariciresinol dehydrogenase-like [Jatropha curcas]
20 Hb_005433_050 0.0776394215 - - PREDICTED: uncharacterized protein At1g66480-like [Populus euphratica]

Gene co-expression network

sample Hb_143766_040 Hb_143766_040 Hb_007337_010 Hb_007337_010 Hb_143766_040--Hb_007337_010 Hb_004981_020 Hb_004981_020 Hb_143766_040--Hb_004981_020 Hb_187247_010 Hb_187247_010 Hb_143766_040--Hb_187247_010 Hb_061590_010 Hb_061590_010 Hb_143766_040--Hb_061590_010 Hb_005726_030 Hb_005726_030 Hb_143766_040--Hb_005726_030 Hb_126040_020 Hb_126040_020 Hb_143766_040--Hb_126040_020 Hb_007337_010--Hb_004981_020 Hb_007337_010--Hb_187247_010 Hb_007337_010--Hb_061590_010 Hb_007337_010--Hb_005726_030 Hb_007337_010--Hb_126040_020 Hb_004981_020--Hb_187247_010 Hb_004981_020--Hb_061590_010 Hb_004981_020--Hb_005726_030 Hb_004981_020--Hb_126040_020 Hb_187247_010--Hb_061590_010 Hb_187247_010--Hb_005726_030 Hb_106528_020 Hb_106528_020 Hb_187247_010--Hb_106528_020 Hb_061590_010--Hb_005726_030 Hb_007437_010 Hb_007437_010 Hb_061590_010--Hb_007437_010 Hb_005726_030--Hb_007437_010 Hb_000201_080 Hb_000201_080 Hb_126040_020--Hb_000201_080 Hb_001604_140 Hb_001604_140 Hb_126040_020--Hb_001604_140 Hb_003685_060 Hb_003685_060 Hb_126040_020--Hb_003685_060 Hb_000022_270 Hb_000022_270 Hb_126040_020--Hb_000022_270
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.132464 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 3.92259 0

CAGE analysis