Hb_144166_010

Information

Type -
Description -
Location Contig144166: 255-2087
Sequence    

Annotation

kegg
ID rcu:RCOM_1443590
description Transportin-3, putative
nr
ID XP_012067423.1
description PREDICTED: importin-13 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L3U1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26921 PE=4 SV=1
Gene Ontology
ID GO:0005622
description importin-related family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_144166_010 0.0 - - PREDICTED: importin-13 [Jatropha curcas]
2 Hb_000982_050 0.0824533291 - - PREDICTED: uncharacterized protein LOC105643124 isoform X1 [Jatropha curcas]
3 Hb_005365_020 0.0827234457 - - hypothetical protein JCGZ_15105 [Jatropha curcas]
4 Hb_000085_150 0.0837679577 - - PREDICTED: putative BPI/LBP family protein At1g04970 [Jatropha curcas]
5 Hb_002078_110 0.0845160765 - - PREDICTED: nuclear pore complex protein NUP54 [Jatropha curcas]
6 Hb_003124_220 0.0866772016 - - PREDICTED: coiled-coil domain-containing protein 93 [Jatropha curcas]
7 Hb_131646_010 0.0868870451 - - protein arginine n-methyltransferase, putative [Ricinus communis]
8 Hb_000200_380 0.0873851692 - - PREDICTED: uncharacterized protein LOC105636933 isoform X2 [Jatropha curcas]
9 Hb_003029_030 0.0905746391 - - PREDICTED: uncharacterized protein LOC105642632 isoform X2 [Jatropha curcas]
10 Hb_000760_020 0.0912623856 - - PREDICTED: E3 ubiquitin-protein ligase RNF185-like isoform X1 [Jatropha curcas]
11 Hb_143395_010 0.0913686771 - - PREDICTED: uncharacterized protein LOC105642243 [Jatropha curcas]
12 Hb_033642_030 0.091917622 - - PREDICTED: G-protein coupled receptor 1 isoform X1 [Jatropha curcas]
13 Hb_000656_250 0.0921781277 - - hypothetical protein JCGZ_24680 [Jatropha curcas]
14 Hb_007416_300 0.0923989042 - - PREDICTED: COP9 signalosome complex subunit 5b-like [Jatropha curcas]
15 Hb_002272_130 0.092402894 - - PREDICTED: DNA excision repair protein ERCC-1 [Jatropha curcas]
16 Hb_000289_040 0.093168847 - - Poly(A) polymerase alpha, putative [Ricinus communis]
17 Hb_004785_100 0.0933746516 - - conserved hypothetical protein [Ricinus communis]
18 Hb_010068_040 0.0938371652 - - PREDICTED: uncharacterized protein LOC105632964 [Jatropha curcas]
19 Hb_002092_080 0.094498723 - - PREDICTED: serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform-like [Jatropha curcas]
20 Hb_001195_560 0.0946775041 - - PREDICTED: lysophospholipid acyltransferase LPEAT1 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_144166_010 Hb_144166_010 Hb_000982_050 Hb_000982_050 Hb_144166_010--Hb_000982_050 Hb_005365_020 Hb_005365_020 Hb_144166_010--Hb_005365_020 Hb_000085_150 Hb_000085_150 Hb_144166_010--Hb_000085_150 Hb_002078_110 Hb_002078_110 Hb_144166_010--Hb_002078_110 Hb_003124_220 Hb_003124_220 Hb_144166_010--Hb_003124_220 Hb_131646_010 Hb_131646_010 Hb_144166_010--Hb_131646_010 Hb_000982_050--Hb_005365_020 Hb_000215_220 Hb_000215_220 Hb_000982_050--Hb_000215_220 Hb_000982_050--Hb_000085_150 Hb_007426_150 Hb_007426_150 Hb_000982_050--Hb_007426_150 Hb_001104_160 Hb_001104_160 Hb_000982_050--Hb_001104_160 Hb_005365_020--Hb_001104_160 Hb_010068_040 Hb_010068_040 Hb_005365_020--Hb_010068_040 Hb_002154_120 Hb_002154_120 Hb_005365_020--Hb_002154_120 Hb_001821_160 Hb_001821_160 Hb_005365_020--Hb_001821_160 Hb_001195_560 Hb_001195_560 Hb_000085_150--Hb_001195_560 Hb_003371_110 Hb_003371_110 Hb_000085_150--Hb_003371_110 Hb_010222_050 Hb_010222_050 Hb_000085_150--Hb_010222_050 Hb_002823_030 Hb_002823_030 Hb_000085_150--Hb_002823_030 Hb_000866_470 Hb_000866_470 Hb_000085_150--Hb_000866_470 Hb_030131_040 Hb_030131_040 Hb_000085_150--Hb_030131_040 Hb_002835_230 Hb_002835_230 Hb_002078_110--Hb_002835_230 Hb_002686_250 Hb_002686_250 Hb_002078_110--Hb_002686_250 Hb_002078_110--Hb_131646_010 Hb_000309_040 Hb_000309_040 Hb_002078_110--Hb_000309_040 Hb_000928_220 Hb_000928_220 Hb_002078_110--Hb_000928_220 Hb_000070_080 Hb_000070_080 Hb_002078_110--Hb_000070_080 Hb_000718_070 Hb_000718_070 Hb_003124_220--Hb_000718_070 Hb_001347_040 Hb_001347_040 Hb_003124_220--Hb_001347_040 Hb_003124_220--Hb_002078_110 Hb_003124_220--Hb_131646_010 Hb_143395_010 Hb_143395_010 Hb_003124_220--Hb_143395_010 Hb_000256_190 Hb_000256_190 Hb_003124_220--Hb_000256_190 Hb_131646_010--Hb_002686_250 Hb_004785_100 Hb_004785_100 Hb_131646_010--Hb_004785_100 Hb_131646_010--Hb_002835_230 Hb_003029_030 Hb_003029_030 Hb_131646_010--Hb_003029_030 Hb_131646_010--Hb_001347_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.29773 3.92837 3.96761 2.86896 5.3196 4.69207
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.39095 2.74809 2.31897 2.01892 2.56486

CAGE analysis