Hb_144528_010

Information

Type -
Description -
Location Contig144528: 932-1971
Sequence    

Annotation

kegg
ID rcu:RCOM_1268740
description type II inositol 5-phosphatase, putative (EC:3.1.3.36)
nr
ID XP_002529102.1
description type II inositol 5-phosphatase, putative [Ricinus communis]
swissprot
ID O80560
description Type I inositol 1,4,5-trisphosphate 5-phosphatase 12 OS=Arabidopsis thaliana GN=5PTASE12 PE=1 SV=1
trembl
ID B9SSY3
description Type II inositol 5-phosphatase, putative OS=Ricinus communis GN=RCOM_1268740 PE=4 SV=1
Gene Ontology
ID GO:0004439
description type i inositol -trisphosphate 5-phosphatase 12-like isoform x2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_11665: 1219-1640
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_144528_010 0.0 - - type II inositol 5-phosphatase, putative [Ricinus communis]
2 Hb_005269_040 0.0628714898 - - PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g06270 [Jatropha curcas]
3 Hb_001538_130 0.0766143594 - - conserved hypothetical protein [Ricinus communis]
4 Hb_005731_120 0.0812524923 transcription factor TF Family: TCP PREDICTED: transcription factor TCP20 [Jatropha curcas]
5 Hb_005914_080 0.0849119658 - - PREDICTED: uncharacterized protein LOC105632176 isoform X2 [Jatropha curcas]
6 Hb_001287_080 0.0854081183 - - conserved hypothetical protein [Ricinus communis]
7 Hb_007881_030 0.0882215879 - - Protein YME1, putative [Ricinus communis]
8 Hb_001638_170 0.0903143605 - - hypothetical protein Csa_3G118170 [Cucumis sativus]
9 Hb_000318_290 0.0913220866 transcription factor TF Family: B3 PREDICTED: B3 domain-containing transcription factor VRN1 isoform X1 [Jatropha curcas]
10 Hb_010997_080 0.0922191221 transcription factor TF Family: mTERF unnamed protein product [Vitis vinifera]
11 Hb_001168_020 0.0926401779 - - PREDICTED: translation initiation factor eIF-2B subunit gamma [Jatropha curcas]
12 Hb_000441_140 0.0926987953 transcription factor TF Family: NF-YA PREDICTED: nuclear transcription factor Y subunit A-7-like isoform X2 [Jatropha curcas]
13 Hb_004767_100 0.0930161916 - - eukaryotic translation initiation factor 2c, putative [Ricinus communis]
14 Hb_020665_040 0.0937805402 transcription factor TF Family: Jumonji PREDICTED: trichohyalin-like [Malus domestica]
15 Hb_001097_050 0.0947261678 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
16 Hb_003750_050 0.0970755569 - - PREDICTED: THO complex subunit 4D isoform X1 [Jatropha curcas]
17 Hb_001377_270 0.0971009468 - - hypothetical protein CICLE_v10021159mg [Citrus clementina]
18 Hb_000032_520 0.0972254377 - - PREDICTED: F-box protein SKIP8-like [Jatropha curcas]
19 Hb_005291_030 0.097762979 transcription factor TF Family: SWI/SNF-BAF60b brg-1 associated factor, putative [Ricinus communis]
20 Hb_004032_150 0.0977741485 - - PREDICTED: chaperone protein dnaJ 10-like [Jatropha curcas]

Gene co-expression network

sample Hb_144528_010 Hb_144528_010 Hb_005269_040 Hb_005269_040 Hb_144528_010--Hb_005269_040 Hb_001538_130 Hb_001538_130 Hb_144528_010--Hb_001538_130 Hb_005731_120 Hb_005731_120 Hb_144528_010--Hb_005731_120 Hb_005914_080 Hb_005914_080 Hb_144528_010--Hb_005914_080 Hb_001287_080 Hb_001287_080 Hb_144528_010--Hb_001287_080 Hb_007881_030 Hb_007881_030 Hb_144528_010--Hb_007881_030 Hb_001377_270 Hb_001377_270 Hb_005269_040--Hb_001377_270 Hb_005269_040--Hb_001538_130 Hb_002662_020 Hb_002662_020 Hb_005269_040--Hb_002662_020 Hb_000192_080 Hb_000192_080 Hb_005269_040--Hb_000192_080 Hb_074715_010 Hb_074715_010 Hb_005269_040--Hb_074715_010 Hb_000032_520 Hb_000032_520 Hb_001538_130--Hb_000032_520 Hb_001198_100 Hb_001198_100 Hb_001538_130--Hb_001198_100 Hb_000395_190 Hb_000395_190 Hb_001538_130--Hb_000395_190 Hb_000009_560 Hb_000009_560 Hb_001538_130--Hb_000009_560 Hb_015934_040 Hb_015934_040 Hb_001538_130--Hb_015934_040 Hb_000035_320 Hb_000035_320 Hb_001538_130--Hb_000035_320 Hb_002235_170 Hb_002235_170 Hb_005731_120--Hb_002235_170 Hb_005291_030 Hb_005291_030 Hb_005731_120--Hb_005291_030 Hb_005731_120--Hb_005914_080 Hb_000031_220 Hb_000031_220 Hb_005731_120--Hb_000031_220 Hb_020665_040 Hb_020665_040 Hb_005731_120--Hb_020665_040 Hb_000009_240 Hb_000009_240 Hb_005914_080--Hb_000009_240 Hb_000023_280 Hb_000023_280 Hb_005914_080--Hb_000023_280 Hb_005188_080 Hb_005188_080 Hb_005914_080--Hb_005188_080 Hb_003940_040 Hb_003940_040 Hb_005914_080--Hb_003940_040 Hb_002271_020 Hb_002271_020 Hb_001287_080--Hb_002271_020 Hb_143398_010 Hb_143398_010 Hb_001287_080--Hb_143398_010 Hb_001287_080--Hb_005291_030 Hb_001357_150 Hb_001357_150 Hb_001287_080--Hb_001357_150 Hb_033594_120 Hb_033594_120 Hb_001287_080--Hb_033594_120 Hb_007451_010 Hb_007451_010 Hb_001287_080--Hb_007451_010 Hb_032225_010 Hb_032225_010 Hb_007881_030--Hb_032225_010 Hb_003777_320 Hb_003777_320 Hb_007881_030--Hb_003777_320 Hb_000635_250 Hb_000635_250 Hb_007881_030--Hb_000635_250 Hb_007881_030--Hb_001538_130 Hb_000092_170 Hb_000092_170 Hb_007881_030--Hb_000092_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.01258 3.49614 1.38534 4.84065 2.7519 5.72792
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.34203 4.58595 2.98865 2.81348 2.6952

CAGE analysis