Hb_144547_010

Information

Type -
Description -
Location Contig144547: 124-837
Sequence    

Annotation

kegg
ID cit:102623211
description putative disease resistance protein RGA1-like
nr
ID KDP43125.1
description hypothetical protein JCGZ_26658 [Jatropha curcas]
swissprot
ID B0W6M9
description Leucine-rich repeat protein soc-2 homolog OS=Culex quinquefasciatus GN=Sur-8 PE=3 SV=1
trembl
ID A0A067LF36
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26658 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_144547_010 0.0 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
2 Hb_000377_140 0.1785039552 - - -
3 Hb_047560_010 0.1845962822 - - PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase [Jatropha curcas]
4 Hb_009102_020 0.2383169197 - - hypothetical protein EUGRSUZ_I01262 [Eucalyptus grandis]
5 Hb_000438_150 0.2513505811 transcription factor TF Family: HMG PREDICTED: high mobility group B protein 7 [Jatropha curcas]
6 Hb_143933_010 0.252473507 - - PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
7 Hb_000197_170 0.2625719564 - - ATP binding protein, putative [Ricinus communis]
8 Hb_002965_180 0.269684474 - - AMSH-like ubiquitin thioesterase 3 [Morus notabilis]
9 Hb_122259_010 0.2707837436 - - -
10 Hb_009372_050 0.2710068437 - - unnamed protein product [Vitis vinifera]
11 Hb_025595_010 0.2711074335 - - hypothetical protein JCGZ_19531 [Jatropha curcas]
12 Hb_000663_030 0.2742707927 - - -
13 Hb_123560_030 0.2811080254 - - UDP-glucosyltransferase, putative [Ricinus communis]
14 Hb_001391_050 0.2866726254 - - PREDICTED: probable carboxylesterase 18 [Jatropha curcas]
15 Hb_004052_160 0.2885453661 - - Chain A, Rna Binding Protein
16 Hb_009476_150 0.292230409 transcription factor TF Family: MYB PREDICTED: transcriptional activator Myb-like [Jatropha curcas]
17 Hb_002343_030 0.2923536078 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000242_020 0.2959448604 - - hypothetical protein CICLE_v100246891mg, partial [Citrus clementina]
19 Hb_130739_010 0.2985897603 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
20 Hb_158349_010 0.3006862662 - - plastid CUL1 [Hevea brasiliensis]

Gene co-expression network

sample Hb_144547_010 Hb_144547_010 Hb_000377_140 Hb_000377_140 Hb_144547_010--Hb_000377_140 Hb_047560_010 Hb_047560_010 Hb_144547_010--Hb_047560_010 Hb_009102_020 Hb_009102_020 Hb_144547_010--Hb_009102_020 Hb_000438_150 Hb_000438_150 Hb_144547_010--Hb_000438_150 Hb_143933_010 Hb_143933_010 Hb_144547_010--Hb_143933_010 Hb_000197_170 Hb_000197_170 Hb_144547_010--Hb_000197_170 Hb_000377_140--Hb_009102_020 Hb_123560_030 Hb_123560_030 Hb_000377_140--Hb_123560_030 Hb_023051_010 Hb_023051_010 Hb_000377_140--Hb_023051_010 Hb_000982_150 Hb_000982_150 Hb_000377_140--Hb_000982_150 Hb_004052_160 Hb_004052_160 Hb_000377_140--Hb_004052_160 Hb_005601_030 Hb_005601_030 Hb_047560_010--Hb_005601_030 Hb_047560_010--Hb_143933_010 Hb_130739_010 Hb_130739_010 Hb_047560_010--Hb_130739_010 Hb_001391_050 Hb_001391_050 Hb_047560_010--Hb_001391_050 Hb_047560_010--Hb_000197_170 Hb_002235_270 Hb_002235_270 Hb_009102_020--Hb_002235_270 Hb_009102_020--Hb_000438_150 Hb_003906_030 Hb_003906_030 Hb_009102_020--Hb_003906_030 Hb_035761_010 Hb_035761_010 Hb_009102_020--Hb_035761_010 Hb_009476_150 Hb_009476_150 Hb_000438_150--Hb_009476_150 Hb_000099_190 Hb_000099_190 Hb_000438_150--Hb_000099_190 Hb_000732_240 Hb_000732_240 Hb_000438_150--Hb_000732_240 Hb_048944_020 Hb_048944_020 Hb_000438_150--Hb_048944_020 Hb_002196_010 Hb_002196_010 Hb_000438_150--Hb_002196_010 Hb_007157_060 Hb_007157_060 Hb_000438_150--Hb_007157_060 Hb_143933_010--Hb_130739_010 Hb_158349_010 Hb_158349_010 Hb_143933_010--Hb_158349_010 Hb_020805_160 Hb_020805_160 Hb_143933_010--Hb_020805_160 Hb_002965_180 Hb_002965_180 Hb_143933_010--Hb_002965_180 Hb_071079_060 Hb_071079_060 Hb_143933_010--Hb_071079_060 Hb_000413_150 Hb_000413_150 Hb_000197_170--Hb_000413_150 Hb_003032_060 Hb_003032_060 Hb_000197_170--Hb_003032_060 Hb_005276_030 Hb_005276_030 Hb_000197_170--Hb_005276_030 Hb_096473_010 Hb_096473_010 Hb_000197_170--Hb_096473_010 Hb_093385_010 Hb_093385_010 Hb_000197_170--Hb_093385_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.5392 2.01375 2.64838 4.40606 0 0.531863
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.150941 0

CAGE analysis