Hb_144598_030

Information

Type -
Description -
Location Contig144598: 17156-23594
Sequence    

Annotation

kegg
ID gmx:100789450
description uncharacterized LOC100789450
nr
ID XP_012081143.1
description PREDICTED: mitotic apparatus protein p62 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K201
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16993 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_11671: 19431-22307
cDNA
(Sanger)
(ID:Location)		 005_I12.ab1: 19431-22302 , 019_H08.ab1: 19431-19620

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_144598_030 0.0 - - PREDICTED: mitotic apparatus protein p62 [Jatropha curcas]
2 Hb_020665_040 0.0655895891 transcription factor TF Family: Jumonji PREDICTED: trichohyalin-like [Malus domestica]
3 Hb_007594_130 0.0723271054 - - PREDICTED: lysophospholipid acyltransferase LPEAT2 isoform X1 [Jatropha curcas]
4 Hb_002671_100 0.0725144067 - - PREDICTED: tRNA (guanine-N(7)-)-methyltransferase-like [Jatropha curcas]
5 Hb_004117_130 0.0772276017 - - PREDICTED: uncharacterized protein LOC105649104 [Jatropha curcas]
6 Hb_004881_020 0.0806885581 - - PREDICTED: serine/threonine-protein kinase rio2-like [Jatropha curcas]
7 Hb_002716_130 0.0807844776 - - PREDICTED: uncharacterized protein LOC105645470 isoform X2 [Jatropha curcas]
8 Hb_000212_240 0.0812018314 - - short-chain dehydrogenase, putative [Ricinus communis]
9 Hb_012008_020 0.0814012273 - - PREDICTED: uncharacterized protein LOC104233229 [Nicotiana sylvestris]
10 Hb_005862_010 0.0825820269 - - PREDICTED: riboflavin biosynthesis protein PYRD, chloroplastic [Jatropha curcas]
11 Hb_185830_020 0.0841454675 - - ABC transporter family protein [Hevea brasiliensis]
12 Hb_020719_030 0.0843274613 - - PREDICTED: ER membrane protein complex subunit 3-like [Jatropha curcas]
13 Hb_010691_060 0.0851804101 - - PREDICTED: 40S ribosomal protein S6 [Jatropha curcas]
14 Hb_004072_020 0.0855814758 - - PREDICTED: uncharacterized protein LOC105635274 [Jatropha curcas]
15 Hb_002391_300 0.0895325763 - - hypothetical protein PHAVU_002G104100g [Phaseolus vulgaris]
16 Hb_001866_110 0.0900629463 - - PREDICTED: trihelix transcription factor GT-3b-like [Jatropha curcas]
17 Hb_000373_240 0.0903369708 - - PREDICTED: uncharacterized protein LOC105640940 isoform X1 [Jatropha curcas]
18 Hb_006252_040 0.0905053161 - - queuine tRNA-ribosyltransferase, putative [Ricinus communis]
19 Hb_001135_060 0.0907036889 - - PREDICTED: probable protein phosphatase 2C 38 [Jatropha curcas]
20 Hb_114343_010 0.091981045 - - PREDICTED: uncharacterized protein LOC105647831 [Jatropha curcas]

Gene co-expression network

sample Hb_144598_030 Hb_144598_030 Hb_020665_040 Hb_020665_040 Hb_144598_030--Hb_020665_040 Hb_007594_130 Hb_007594_130 Hb_144598_030--Hb_007594_130 Hb_002671_100 Hb_002671_100 Hb_144598_030--Hb_002671_100 Hb_004117_130 Hb_004117_130 Hb_144598_030--Hb_004117_130 Hb_004881_020 Hb_004881_020 Hb_144598_030--Hb_004881_020 Hb_002716_130 Hb_002716_130 Hb_144598_030--Hb_002716_130 Hb_002271_020 Hb_002271_020 Hb_020665_040--Hb_002271_020 Hb_020665_040--Hb_002716_130 Hb_005731_120 Hb_005731_120 Hb_020665_040--Hb_005731_120 Hb_000318_290 Hb_000318_290 Hb_020665_040--Hb_000318_290 Hb_033594_120 Hb_033594_120 Hb_020665_040--Hb_033594_120 Hb_007594_130--Hb_004881_020 Hb_003952_070 Hb_003952_070 Hb_007594_130--Hb_003952_070 Hb_007594_130--Hb_002671_100 Hb_000212_240 Hb_000212_240 Hb_007594_130--Hb_000212_240 Hb_003030_070 Hb_003030_070 Hb_007594_130--Hb_003030_070 Hb_040262_010 Hb_040262_010 Hb_007594_130--Hb_040262_010 Hb_002671_100--Hb_040262_010 Hb_002671_100--Hb_004881_020 Hb_002671_100--Hb_004117_130 Hb_000260_170 Hb_000260_170 Hb_002671_100--Hb_000260_170 Hb_004117_130--Hb_002716_130 Hb_020719_030 Hb_020719_030 Hb_004117_130--Hb_020719_030 Hb_004117_130--Hb_000260_170 Hb_000933_090 Hb_000933_090 Hb_004117_130--Hb_000933_090 Hb_007044_080 Hb_007044_080 Hb_004117_130--Hb_007044_080 Hb_000023_220 Hb_000023_220 Hb_004117_130--Hb_000023_220 Hb_004881_020--Hb_003952_070 Hb_006252_040 Hb_006252_040 Hb_004881_020--Hb_006252_040 Hb_004881_020--Hb_000212_240 Hb_103012_010 Hb_103012_010 Hb_004881_020--Hb_103012_010 Hb_000010_330 Hb_000010_330 Hb_002716_130--Hb_000010_330 Hb_000085_160 Hb_000085_160 Hb_002716_130--Hb_000085_160 Hb_002716_130--Hb_000212_240 Hb_002716_130--Hb_006252_040 Hb_007317_110 Hb_007317_110 Hb_002716_130--Hb_007317_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
48.2173 25.0846 22.8819 45.1046 60.2154 107.276
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
53.9856 53.8942 36.0975 32.5646 28.8817

CAGE analysis