Hb_144898_010

Information

Type -
Description -
Location Contig144898: 160-1457
Sequence    

Annotation

kegg
ID cic:CICLE_v10026360mg
description hypothetical protein
nr
ID XP_012074809.1
description PREDICTED: 60S ribosomal protein L7-2-like [Jatropha curcas]
swissprot
ID P60040
description 60S ribosomal protein L7-2 OS=Arabidopsis thaliana GN=RPL7B PE=2 SV=1
trembl
ID A0A067KHB6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08960 PE=3 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_144898_010 0.0 - - PREDICTED: 60S ribosomal protein L7-2-like [Jatropha curcas]
2 Hb_000107_140 0.0965640861 - - -
3 Hb_181320_010 0.107554477 - - PREDICTED: signal recognition particle 14 kDa protein [Jatropha curcas]
4 Hb_005305_060 0.1357825728 - - hypothetical protein MIMGU_mgv1a015111mg [Erythranthe guttata]
5 Hb_001722_020 0.1371193856 - - -
6 Hb_005054_070 0.1399889786 - - unnamed protein product [Vitis vinifera]
7 Hb_012807_080 0.1431223292 - - hypothetical protein CICLE_v10028099mg [Citrus clementina]
8 Hb_005016_150 0.1435893793 - - -
9 Hb_176117_010 0.1454313967 - - Cold-inducible RNA-binding protein [Morus notabilis]
10 Hb_004241_040 0.1478446427 - - -
11 Hb_004662_010 0.1486032719 - - Nascent polypeptide-associated complex subunit beta [Medicago truncatula]
12 Hb_073339_010 0.1487873281 - - hypothetical protein 30 [Hevea brasiliensis]
13 Hb_032496_030 0.1516935957 - - PREDICTED: WEB family protein At3g02930, chloroplastic [Jatropha curcas]
14 Hb_073367_010 0.1532686596 - - PREDICTED: origin of replication complex subunit 2 [Jatropha curcas]
15 Hb_027445_060 0.1546990133 - - PREDICTED: pescadillo homolog isoform X1 [Jatropha curcas]
16 Hb_012305_040 0.155500424 - - PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 9A-like [Jatropha curcas]
17 Hb_000622_100 0.1572743804 - - PREDICTED: pre-rRNA-processing protein RIX1-like [Jatropha curcas]
18 Hb_004117_180 0.1616861859 - - -
19 Hb_000891_040 0.1627152908 - - hypothetical protein JCGZ_11252 [Jatropha curcas]
20 Hb_001477_010 0.1653150566 - - PREDICTED: dnaJ homolog subfamily B member 13-like [Cicer arietinum]

Gene co-expression network

sample Hb_144898_010 Hb_144898_010 Hb_000107_140 Hb_000107_140 Hb_144898_010--Hb_000107_140 Hb_181320_010 Hb_181320_010 Hb_144898_010--Hb_181320_010 Hb_005305_060 Hb_005305_060 Hb_144898_010--Hb_005305_060 Hb_001722_020 Hb_001722_020 Hb_144898_010--Hb_001722_020 Hb_005054_070 Hb_005054_070 Hb_144898_010--Hb_005054_070 Hb_012807_080 Hb_012807_080 Hb_144898_010--Hb_012807_080 Hb_000622_100 Hb_000622_100 Hb_000107_140--Hb_000622_100 Hb_073367_010 Hb_073367_010 Hb_000107_140--Hb_073367_010 Hb_011174_010 Hb_011174_010 Hb_000107_140--Hb_011174_010 Hb_004117_180 Hb_004117_180 Hb_000107_140--Hb_004117_180 Hb_004607_120 Hb_004607_120 Hb_000107_140--Hb_004607_120 Hb_176117_010 Hb_176117_010 Hb_181320_010--Hb_176117_010 Hb_005016_150 Hb_005016_150 Hb_181320_010--Hb_005016_150 Hb_004662_010 Hb_004662_010 Hb_181320_010--Hb_004662_010 Hb_000891_040 Hb_000891_040 Hb_181320_010--Hb_000891_040 Hb_000270_500 Hb_000270_500 Hb_181320_010--Hb_000270_500 Hb_000329_770 Hb_000329_770 Hb_005305_060--Hb_000329_770 Hb_027445_060 Hb_027445_060 Hb_005305_060--Hb_027445_060 Hb_005305_060--Hb_001722_020 Hb_115919_010 Hb_115919_010 Hb_005305_060--Hb_115919_010 Hb_005965_010 Hb_005965_010 Hb_005305_060--Hb_005965_010 Hb_088774_010 Hb_088774_010 Hb_001722_020--Hb_088774_010 Hb_001722_020--Hb_005965_010 Hb_071923_010 Hb_071923_010 Hb_001722_020--Hb_071923_010 Hb_000295_100 Hb_000295_100 Hb_001722_020--Hb_000295_100 Hb_000176_120 Hb_000176_120 Hb_005054_070--Hb_000176_120 Hb_136731_010 Hb_136731_010 Hb_005054_070--Hb_136731_010 Hb_032496_030 Hb_032496_030 Hb_005054_070--Hb_032496_030 Hb_000001_040 Hb_000001_040 Hb_005054_070--Hb_000001_040 Hb_004241_040 Hb_004241_040 Hb_005054_070--Hb_004241_040 Hb_006455_110 Hb_006455_110 Hb_012807_080--Hb_006455_110 Hb_001477_010 Hb_001477_010 Hb_012807_080--Hb_001477_010 Hb_006455_090 Hb_006455_090 Hb_012807_080--Hb_006455_090 Hb_002046_040 Hb_002046_040 Hb_012807_080--Hb_002046_040 Hb_003299_090 Hb_003299_090 Hb_012807_080--Hb_003299_090 Hb_003711_040 Hb_003711_040 Hb_012807_080--Hb_003711_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
14.1834 1.57709 1.74491 5.3325 15.6181 43.1505
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
11.462 12.0499 2.25963 3.28607 0.497111

CAGE analysis