Hb_145211_010

Information

Type -
Description -
Location Contig145211: 73-605
Sequence    

Annotation

kegg
ID cic:CICLE_v10003434mg
description hypothetical protein
nr
ID EPS69119.1
description hypothetical protein M569_05648, partial [Genlisea aurea]
swissprot
ID P10978
description Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1
trembl
ID S8CPK9
description Uncharacterized protein (Fragment) OS=Genlisea aurea GN=M569_05648 PE=4 SV=1
Gene Ontology
ID GO:0005488
description hypothetical protein M569_05648, partial

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_145211_010 0.0 - - hypothetical protein M569_05648, partial [Genlisea aurea]
2 Hb_000675_040 0.0448857777 - - hypothetical protein OsI_02937 [Oryza sativa Indica Group]
3 Hb_059780_010 0.0546959068 - - PREDICTED: uncharacterized protein LOC104885482, partial [Beta vulgaris subsp. vulgaris]
4 Hb_002566_010 0.1254044286 - - PREDICTED: uncharacterized protein LOC105643984 isoform X1 [Jatropha curcas]
5 Hb_000946_030 0.1284634754 - - hypothetical protein JCGZ_10707 [Jatropha curcas]
6 Hb_121441_010 0.1289145458 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
7 Hb_002122_050 0.1385854649 - - PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
8 Hb_000644_040 0.1400984286 desease resistance Gene Name: NB-ARC hypothetical protein VITISV_009157 [Vitis vinifera]
9 Hb_007676_060 0.1419183335 - - PREDICTED: cellulose synthase-like protein E2 [Pyrus x bretschneideri]
10 Hb_000982_120 0.1453465017 transcription factor TF Family: Orphans sensory transduction histidine kinase bacterial, putative [Ricinus communis]
11 Hb_002555_030 0.1496174576 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1 [Malus domestica]
12 Hb_031931_030 0.1607280155 - - lipid binding protein, putative [Ricinus communis]
13 Hb_131320_010 0.1614907148 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 isoform X2 [Jatropha curcas]
14 Hb_000149_090 0.1618127661 - - -
15 Hb_010866_010 0.1683773755 - - PREDICTED: isoflavone 2'-hydroxylase-like [Vitis vinifera]
16 Hb_001597_090 0.1714327587 - - -
17 Hb_009230_020 0.1716567427 desease resistance Gene Name: NB-ARC conserved hypothetical protein [Ricinus communis]
18 Hb_000330_120 0.1812822633 - - PREDICTED: bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase-like [Nelumbo nucifera]
19 Hb_135554_010 0.186687585 - - Insulin-degrading enzyme, putative [Ricinus communis]
20 Hb_006651_010 0.1914047169 - - PREDICTED: protein disulfide isomerase-like 1-4-like [Citrus sinensis]

Gene co-expression network

sample Hb_145211_010 Hb_145211_010 Hb_000675_040 Hb_000675_040 Hb_145211_010--Hb_000675_040 Hb_059780_010 Hb_059780_010 Hb_145211_010--Hb_059780_010 Hb_002566_010 Hb_002566_010 Hb_145211_010--Hb_002566_010 Hb_000946_030 Hb_000946_030 Hb_145211_010--Hb_000946_030 Hb_121441_010 Hb_121441_010 Hb_145211_010--Hb_121441_010 Hb_002122_050 Hb_002122_050 Hb_145211_010--Hb_002122_050 Hb_000675_040--Hb_059780_010 Hb_000675_040--Hb_121441_010 Hb_131320_010 Hb_131320_010 Hb_000675_040--Hb_131320_010 Hb_000675_040--Hb_002122_050 Hb_007676_060 Hb_007676_060 Hb_000675_040--Hb_007676_060 Hb_059780_010--Hb_121441_010 Hb_059780_010--Hb_002566_010 Hb_000982_120 Hb_000982_120 Hb_059780_010--Hb_000982_120 Hb_031931_030 Hb_031931_030 Hb_059780_010--Hb_031931_030 Hb_002566_010--Hb_000982_120 Hb_002566_010--Hb_031931_030 Hb_010761_030 Hb_010761_030 Hb_002566_010--Hb_010761_030 Hb_000149_090 Hb_000149_090 Hb_002566_010--Hb_000149_090 Hb_010866_010 Hb_010866_010 Hb_000946_030--Hb_010866_010 Hb_000330_120 Hb_000330_120 Hb_000946_030--Hb_000330_120 Hb_002965_130 Hb_002965_130 Hb_000946_030--Hb_002965_130 Hb_000946_030--Hb_059780_010 Hb_000946_030--Hb_000675_040 Hb_121441_010--Hb_000149_090 Hb_121441_010--Hb_000982_120 Hb_121441_010--Hb_002566_010 Hb_002122_050--Hb_059780_010 Hb_009230_020 Hb_009230_020 Hb_002122_050--Hb_009230_020 Hb_002122_050--Hb_007676_060 Hb_002122_050--Hb_131320_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0443043 0 0.0553828 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.27532 0.180252

CAGE analysis