Hb_145314_010

Information

Type -
Description -
Location Contig145314: 2706-3922
Sequence    

Annotation

kegg
ID rcu:RCOM_0204710
description jun activation domain binding protein, putative
nr
ID XP_012076336.1
description PREDICTED: COP9 signalosome complex subunit 5b-like [Jatropha curcas]
swissprot
ID Q9FVU9
description COP9 signalosome complex subunit 5a OS=Arabidopsis thaliana GN=CSN5A PE=1 SV=1
trembl
ID A0A067KNQ1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07015 PE=4 SV=1
Gene Ontology
ID GO:0005515
description cop9 signalosome complex subunit 5b-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_145314_010 0.0 - - PREDICTED: COP9 signalosome complex subunit 5b-like [Jatropha curcas]
2 Hb_001454_130 0.0716222764 - - Xyloglucan 6-xylosyltransferase, putative [Ricinus communis]
3 Hb_000205_300 0.0835018617 - - PREDICTED: uncharacterized protein LOC105647767 [Jatropha curcas]
4 Hb_011671_240 0.085735115 - - PREDICTED: WD repeat-containing protein WRAP73-like [Jatropha curcas]
5 Hb_106724_020 0.0911808485 - - PREDICTED: actin-related protein 2/3 complex subunit 1A-like isoform X1 [Populus euphratica]
6 Hb_000120_060 0.0937740223 - - PREDICTED: peptidyl-prolyl cis-trans isomerase CYP20-1 [Populus euphratica]
7 Hb_003693_070 0.0954405613 - - PREDICTED: S-(hydroxymethyl)glutathione dehydrogenase [Jatropha curcas]
8 Hb_000451_010 0.0965103835 - - secretory carrier membrane protein, putative [Ricinus communis]
9 Hb_003206_070 0.0967982961 - - organic anion transporter, putative [Ricinus communis]
10 Hb_003813_130 0.0974025709 - - PREDICTED: plastidic glucose transporter 4 [Jatropha curcas]
11 Hb_005170_040 0.0994854495 - - PREDICTED: probable protein S-acyltransferase 7 [Jatropha curcas]
12 Hb_032208_090 0.0995226695 - - PREDICTED: serine/threonine-protein phosphatase PP2A catalytic subunit [Jatropha curcas]
13 Hb_000618_040 0.09954072 - - hypothetical protein CICLE_v10027942mg [Citrus clementina]
14 Hb_001102_140 0.1007025428 - - PREDICTED: methyl-CpG-binding domain-containing protein 2-like [Jatropha curcas]
15 Hb_000630_050 0.1008984638 - - conserved hypothetical protein [Ricinus communis]
16 Hb_000019_030 0.1018177168 - - PREDICTED: V-type proton ATPase subunit C [Gossypium raimondii]
17 Hb_004055_030 0.103265036 - - casein kinase, putative [Ricinus communis]
18 Hb_000976_160 0.1034140516 - - PREDICTED: uncharacterized protein LOC105646211 isoform X1 [Jatropha curcas]
19 Hb_143629_210 0.1036809912 - - PREDICTED: transcription factor PIF3 isoform X1 [Jatropha curcas]
20 Hb_007059_010 0.1038389637 - - PREDICTED: uncharacterized protein LOC105642418 [Jatropha curcas]

Gene co-expression network

sample Hb_145314_010 Hb_145314_010 Hb_001454_130 Hb_001454_130 Hb_145314_010--Hb_001454_130 Hb_000205_300 Hb_000205_300 Hb_145314_010--Hb_000205_300 Hb_011671_240 Hb_011671_240 Hb_145314_010--Hb_011671_240 Hb_106724_020 Hb_106724_020 Hb_145314_010--Hb_106724_020 Hb_000120_060 Hb_000120_060 Hb_145314_010--Hb_000120_060 Hb_003693_070 Hb_003693_070 Hb_145314_010--Hb_003693_070 Hb_000083_250 Hb_000083_250 Hb_001454_130--Hb_000083_250 Hb_000630_050 Hb_000630_050 Hb_001454_130--Hb_000630_050 Hb_000808_280 Hb_000808_280 Hb_001454_130--Hb_000808_280 Hb_001454_130--Hb_106724_020 Hb_150986_010 Hb_150986_010 Hb_001454_130--Hb_150986_010 Hb_000603_150 Hb_000603_150 Hb_000205_300--Hb_000603_150 Hb_004310_020 Hb_004310_020 Hb_000205_300--Hb_004310_020 Hb_158062_010 Hb_158062_010 Hb_000205_300--Hb_158062_010 Hb_000120_670 Hb_000120_670 Hb_000205_300--Hb_000120_670 Hb_000205_300--Hb_003693_070 Hb_010712_030 Hb_010712_030 Hb_000205_300--Hb_010712_030 Hb_000451_010 Hb_000451_010 Hb_011671_240--Hb_000451_010 Hb_000019_030 Hb_000019_030 Hb_011671_240--Hb_000019_030 Hb_000618_040 Hb_000618_040 Hb_011671_240--Hb_000618_040 Hb_001575_090 Hb_001575_090 Hb_011671_240--Hb_001575_090 Hb_004907_080 Hb_004907_080 Hb_011671_240--Hb_004907_080 Hb_019280_040 Hb_019280_040 Hb_011671_240--Hb_019280_040 Hb_106724_020--Hb_000630_050 Hb_003813_130 Hb_003813_130 Hb_106724_020--Hb_003813_130 Hb_004055_030 Hb_004055_030 Hb_106724_020--Hb_004055_030 Hb_001102_140 Hb_001102_140 Hb_106724_020--Hb_001102_140 Hb_106724_020--Hb_000808_280 Hb_000120_060--Hb_003693_070 Hb_000270_490 Hb_000270_490 Hb_000120_060--Hb_000270_490 Hb_010142_030 Hb_010142_030 Hb_000120_060--Hb_010142_030 Hb_000120_060--Hb_000808_280 Hb_001492_020 Hb_001492_020 Hb_000120_060--Hb_001492_020 Hb_002783_240 Hb_002783_240 Hb_000120_060--Hb_002783_240 Hb_003693_070--Hb_010142_030 Hb_003693_070--Hb_000808_280 Hb_004046_050 Hb_004046_050 Hb_003693_070--Hb_004046_050 Hb_003693_070--Hb_000019_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
22.8979 11.6626 11.2562 26.5866 23.3815 26.8428
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
26.7901 13.5652 28.833 15.6934 6.05363

CAGE analysis