Hb_145629_010

Information

Type -
Description -
Location Contig145629: 391-1099
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_145629_010 0.0 - - -
2 Hb_000481_050 0.1411363465 - - PREDICTED: uncharacterized protein LOC105636546 [Jatropha curcas]
3 Hb_002344_130 0.1454565905 - - PREDICTED: copper transporter 5 [Jatropha curcas]
4 Hb_003938_160 0.1644592382 - - PREDICTED: transcription factor bHLH155 [Jatropha curcas]
5 Hb_066913_010 0.1649031583 - - hypothetical protein POPTR_0006s03150g [Populus trichocarpa]
6 Hb_001135_140 0.1669664385 - - PREDICTED: serine/threonine-protein kinase PBS1-like [Malus domestica]
7 Hb_000363_330 0.167321846 - - -
8 Hb_006636_010 0.1683213953 - - PREDICTED: uncharacterized protein LOC105637987 [Jatropha curcas]
9 Hb_073395_010 0.1700489352 - - -
10 Hb_130613_010 0.1708261937 - - Charged multivesicular body protein 2a, putative [Ricinus communis]
11 Hb_000264_360 0.1713706868 - - hypothetical protein JCGZ_21443 [Jatropha curcas]
12 Hb_001396_110 0.1717331539 - - DNA primase large subunit, putative [Ricinus communis]
13 Hb_085972_010 0.1758462597 transcription factor TF Family: NAC NAC transcription factor 066 [Jatropha curcas]
14 Hb_146675_010 0.1801910659 - - PREDICTED: peroxisomal nicotinamide adenine dinucleotide carrier-like isoform X2 [Malus domestica]
15 Hb_006117_060 0.182024059 - - hypothetical protein CARUB_v10024452mg [Capsella rubella]
16 Hb_000359_140 0.1832326884 - - PREDICTED: transmembrane protein 56-like [Jatropha curcas]
17 Hb_000125_010 0.1837897331 transcription factor TF Family: mTERF -
18 Hb_076875_020 0.1844459042 - - PREDICTED: alpha/beta hydrolase domain-containing protein 17B [Jatropha curcas]
19 Hb_012760_130 0.1856086266 - - PREDICTED: uncharacterized protein LOC105647093 [Jatropha curcas]
20 Hb_000125_080 0.187944213 transcription factor TF Family: mTERF -

Gene co-expression network

sample Hb_145629_010 Hb_145629_010 Hb_000481_050 Hb_000481_050 Hb_145629_010--Hb_000481_050 Hb_002344_130 Hb_002344_130 Hb_145629_010--Hb_002344_130 Hb_003938_160 Hb_003938_160 Hb_145629_010--Hb_003938_160 Hb_066913_010 Hb_066913_010 Hb_145629_010--Hb_066913_010 Hb_001135_140 Hb_001135_140 Hb_145629_010--Hb_001135_140 Hb_000363_330 Hb_000363_330 Hb_145629_010--Hb_000363_330 Hb_000125_020 Hb_000125_020 Hb_000481_050--Hb_000125_020 Hb_000125_010 Hb_000125_010 Hb_000481_050--Hb_000125_010 Hb_001747_030 Hb_001747_030 Hb_000481_050--Hb_001747_030 Hb_000342_160 Hb_000342_160 Hb_000481_050--Hb_000342_160 Hb_089202_010 Hb_089202_010 Hb_000481_050--Hb_089202_010 Hb_000003_540 Hb_000003_540 Hb_002344_130--Hb_000003_540 Hb_000111_030 Hb_000111_030 Hb_002344_130--Hb_000111_030 Hb_000023_290 Hb_000023_290 Hb_002344_130--Hb_000023_290 Hb_000245_080 Hb_000245_080 Hb_002344_130--Hb_000245_080 Hb_002344_130--Hb_001747_030 Hb_013057_020 Hb_013057_020 Hb_003938_160--Hb_013057_020 Hb_000384_110 Hb_000384_110 Hb_003938_160--Hb_000384_110 Hb_004450_050 Hb_004450_050 Hb_003938_160--Hb_004450_050 Hb_003938_160--Hb_002344_130 Hb_007926_050 Hb_007926_050 Hb_003938_160--Hb_007926_050 Hb_002388_010 Hb_002388_010 Hb_066913_010--Hb_002388_010 Hb_002687_080 Hb_002687_080 Hb_066913_010--Hb_002687_080 Hb_133724_010 Hb_133724_010 Hb_066913_010--Hb_133724_010 Hb_002192_090 Hb_002192_090 Hb_066913_010--Hb_002192_090 Hb_066913_010--Hb_000363_330 Hb_005023_030 Hb_005023_030 Hb_001135_140--Hb_005023_030 Hb_002110_040 Hb_002110_040 Hb_001135_140--Hb_002110_040 Hb_115107_010 Hb_115107_010 Hb_001135_140--Hb_115107_010 Hb_000359_140 Hb_000359_140 Hb_001135_140--Hb_000359_140 Hb_002067_120 Hb_002067_120 Hb_001135_140--Hb_002067_120 Hb_001018_130 Hb_001018_130 Hb_001135_140--Hb_001018_130 Hb_130613_010 Hb_130613_010 Hb_000363_330--Hb_130613_010 Hb_001911_040 Hb_001911_040 Hb_000363_330--Hb_001911_040 Hb_004883_050 Hb_004883_050 Hb_000363_330--Hb_004883_050 Hb_012760_130 Hb_012760_130 Hb_000363_330--Hb_012760_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.20284 11.5266 2.15225 23.5705 2.42493 16.4796
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
8.25257 12.3878 6.54066 6.73577 0.770454

CAGE analysis