Hb_145761_010

Information

Type -
Description -
Location Contig145761: 312-1075
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_145761_010 0.0 - - -
2 Hb_000221_100 0.1052464578 - - hypothetical protein POPTR_0006s07000g [Populus trichocarpa]
3 Hb_000680_150 0.1539801391 - - PREDICTED: protein STU1-like [Jatropha curcas]
4 Hb_003777_070 0.1620939786 - - -
5 Hb_002918_280 0.1624372333 - - hypothetical protein POPTR_0004s04800g [Populus trichocarpa]
6 Hb_000977_140 0.166446141 - - PREDICTED: uncharacterized protein LOC105801335 [Gossypium raimondii]
7 Hb_000183_070 0.1709460347 - - -
8 Hb_006452_190 0.1740380674 - - PREDICTED: 3-isopropylmalate dehydrogenase 2, chloroplastic-like [Jatropha curcas]
9 Hb_007451_030 0.1742508582 - - PREDICTED: mitochondrial thiamine pyrophosphate carrier isoform X1 [Jatropha curcas]
10 Hb_007625_020 0.1756920546 - - PREDICTED: casein kinase II subunit alpha-like [Sesamum indicum]
11 Hb_001386_130 0.1763177652 - - Mitochondrial import receptor subunit TOM20, putative [Ricinus communis]
12 Hb_000352_150 0.1810500919 - - hypothetical protein JCGZ_11641 [Jatropha curcas]
13 Hb_001980_020 0.1851415814 - - -
14 Hb_000038_130 0.1906696857 - - -
15 Hb_003788_040 0.1912091463 - - -
16 Hb_012779_110 0.1934229439 - - PREDICTED: uncharacterized protein LOC105650717 [Jatropha curcas]
17 Hb_005031_070 0.1959512077 - - RecName: Full=Major latex allergen Hev b 5; AltName: Allergen=Hev b 5 [Hevea brasiliensis]
18 Hb_001158_030 0.196394655 - - -
19 Hb_000590_090 0.196493772 - - PREDICTED: sulfate transporter 4.1, chloroplastic-like isoform X1 [Jatropha curcas]
20 Hb_002875_090 0.1968901272 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_145761_010 Hb_145761_010 Hb_000221_100 Hb_000221_100 Hb_145761_010--Hb_000221_100 Hb_000680_150 Hb_000680_150 Hb_145761_010--Hb_000680_150 Hb_003777_070 Hb_003777_070 Hb_145761_010--Hb_003777_070 Hb_002918_280 Hb_002918_280 Hb_145761_010--Hb_002918_280 Hb_000977_140 Hb_000977_140 Hb_145761_010--Hb_000977_140 Hb_000183_070 Hb_000183_070 Hb_145761_010--Hb_000183_070 Hb_000221_100--Hb_002918_280 Hb_007625_020 Hb_007625_020 Hb_000221_100--Hb_007625_020 Hb_007451_030 Hb_007451_030 Hb_000221_100--Hb_007451_030 Hb_000221_100--Hb_000977_140 Hb_000221_100--Hb_000680_150 Hb_001386_130 Hb_001386_130 Hb_000680_150--Hb_001386_130 Hb_000590_090 Hb_000590_090 Hb_000680_150--Hb_000590_090 Hb_000680_150--Hb_007451_030 Hb_002681_040 Hb_002681_040 Hb_000680_150--Hb_002681_040 Hb_001514_020 Hb_001514_020 Hb_000680_150--Hb_001514_020 Hb_001493_100 Hb_001493_100 Hb_000680_150--Hb_001493_100 Hb_003253_010 Hb_003253_010 Hb_003777_070--Hb_003253_010 Hb_010098_080 Hb_010098_080 Hb_003777_070--Hb_010098_080 Hb_001980_020 Hb_001980_020 Hb_003777_070--Hb_001980_020 Hb_000038_130 Hb_000038_130 Hb_003777_070--Hb_000038_130 Hb_000352_150 Hb_000352_150 Hb_003777_070--Hb_000352_150 Hb_007810_050 Hb_007810_050 Hb_003777_070--Hb_007810_050 Hb_010883_210 Hb_010883_210 Hb_002918_280--Hb_010883_210 Hb_084934_010 Hb_084934_010 Hb_002918_280--Hb_084934_010 Hb_005031_070 Hb_005031_070 Hb_002918_280--Hb_005031_070 Hb_002918_280--Hb_000680_150 Hb_002918_280--Hb_001386_130 Hb_044662_040 Hb_044662_040 Hb_000977_140--Hb_044662_040 Hb_007992_030 Hb_007992_030 Hb_000977_140--Hb_007992_030 Hb_178345_010 Hb_178345_010 Hb_000977_140--Hb_178345_010 Hb_000977_140--Hb_000183_070 Hb_001437_300 Hb_001437_300 Hb_000977_140--Hb_001437_300 Hb_000977_140--Hb_000038_130 Hb_005714_040 Hb_005714_040 Hb_000183_070--Hb_005714_040 Hb_000183_070--Hb_001437_300 Hb_005015_010 Hb_005015_010 Hb_000183_070--Hb_005015_010 Hb_006501_150 Hb_006501_150 Hb_000183_070--Hb_006501_150 Hb_006452_190 Hb_006452_190 Hb_000183_070--Hb_006452_190 Hb_005389_140 Hb_005389_140 Hb_000183_070--Hb_005389_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
17.8597 2.59083 0.517425 0 14.9385 7.25201
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
14.101 15.9387 1.72457 0.417604 0.376376

CAGE analysis