Hb_145915_010

Information

Type -
Description -
Location Contig145915: 936-2052
Sequence    

Annotation

kegg
ID pop:POPTR_0008s09730g
description POPTRDRAFT_765848; hypothetical protein
nr
ID XP_012068353.1
description PREDICTED: uncharacterized protein LOC105630963 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LA04
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15737 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_145915_010 0.0 - - PREDICTED: uncharacterized protein LOC105630963 [Jatropha curcas]
2 Hb_003170_040 0.0909907512 - - PREDICTED: microfibrillar-associated protein 1-like [Prunus mume]
3 Hb_020665_010 0.0972599546 - - PREDICTED: uncharacterized protein LOC103438977 isoform X2 [Malus domestica]
4 Hb_012286_010 0.1103777819 - - PREDICTED: eukaryotic translation initiation factor 3 subunit C-like [Jatropha curcas]
5 Hb_009270_010 0.1143487517 - - PREDICTED: uncharacterized protein LOC103421213 [Malus domestica]
6 Hb_002276_060 0.1157899493 - - hypothetical protein CISIN_1g002019mg [Citrus sinensis]
7 Hb_000661_030 0.1158595327 - - PREDICTED: uncharacterized protein LOC105650374 [Jatropha curcas]
8 Hb_000041_090 0.1174464595 - - PREDICTED: uncharacterized protein LOC105641452 [Jatropha curcas]
9 Hb_005181_110 0.1188086576 - - PREDICTED: FIP1[V]-like protein [Jatropha curcas]
10 Hb_001439_140 0.1188725186 - - pattern formation protein, putative [Ricinus communis]
11 Hb_000193_310 0.1205483792 - - PREDICTED: pentatricopeptide repeat-containing protein At5g44230 [Jatropha curcas]
12 Hb_000803_260 0.1218758634 transcription factor TF Family: DDT PREDICTED: uncharacterized protein LOC105648320 [Jatropha curcas]
13 Hb_010710_070 0.1219716541 - - PREDICTED: protein TOC75-3, chloroplastic-like [Populus euphratica]
14 Hb_007922_020 0.1232887328 - - PREDICTED: uncharacterized protein LOC105646505 [Jatropha curcas]
15 Hb_012799_030 0.1235800521 - - PREDICTED: pentatricopeptide repeat-containing protein At1g55630-like [Jatropha curcas]
16 Hb_000034_040 0.1246233067 - - PREDICTED: histidine--tRNA ligase [Jatropha curcas]
17 Hb_007416_160 0.1251381456 - - PREDICTED: centromere-associated protein E isoform X1 [Nelumbo nucifera]
18 Hb_000318_390 0.1254653792 - - PREDICTED: uncharacterized protein LOC105631693 isoform X1 [Jatropha curcas]
19 Hb_001435_030 0.1255657595 - - PREDICTED: uncharacterized protein LOC105645073 [Jatropha curcas]
20 Hb_003376_400 0.125938786 - - PREDICTED: pentatricopeptide repeat-containing protein At2g37230 [Jatropha curcas]

Gene co-expression network

sample Hb_145915_010 Hb_145915_010 Hb_003170_040 Hb_003170_040 Hb_145915_010--Hb_003170_040 Hb_020665_010 Hb_020665_010 Hb_145915_010--Hb_020665_010 Hb_012286_010 Hb_012286_010 Hb_145915_010--Hb_012286_010 Hb_009270_010 Hb_009270_010 Hb_145915_010--Hb_009270_010 Hb_002276_060 Hb_002276_060 Hb_145915_010--Hb_002276_060 Hb_000661_030 Hb_000661_030 Hb_145915_010--Hb_000661_030 Hb_007545_030 Hb_007545_030 Hb_003170_040--Hb_007545_030 Hb_003001_150 Hb_003001_150 Hb_003170_040--Hb_003001_150 Hb_003170_040--Hb_002276_060 Hb_001439_140 Hb_001439_140 Hb_003170_040--Hb_001439_140 Hb_000072_150 Hb_000072_150 Hb_003170_040--Hb_000072_150 Hb_020665_010--Hb_009270_010 Hb_007922_020 Hb_007922_020 Hb_020665_010--Hb_007922_020 Hb_001010_070 Hb_001010_070 Hb_020665_010--Hb_001010_070 Hb_007317_140 Hb_007317_140 Hb_020665_010--Hb_007317_140 Hb_001005_050 Hb_001005_050 Hb_020665_010--Hb_001005_050 Hb_002024_010 Hb_002024_010 Hb_012286_010--Hb_002024_010 Hb_012286_010--Hb_002276_060 Hb_004994_380 Hb_004994_380 Hb_012286_010--Hb_004994_380 Hb_002193_010 Hb_002193_010 Hb_012286_010--Hb_002193_010 Hb_008489_020 Hb_008489_020 Hb_012286_010--Hb_008489_020 Hb_000170_190 Hb_000170_190 Hb_012286_010--Hb_000170_190 Hb_001117_170 Hb_001117_170 Hb_009270_010--Hb_001117_170 Hb_000005_190 Hb_000005_190 Hb_009270_010--Hb_000005_190 Hb_188126_010 Hb_188126_010 Hb_009270_010--Hb_188126_010 Hb_003498_130 Hb_003498_130 Hb_009270_010--Hb_003498_130 Hb_002276_060--Hb_000170_190 Hb_000034_040 Hb_000034_040 Hb_002276_060--Hb_000034_040 Hb_002276_060--Hb_003001_150 Hb_002276_060--Hb_002193_010 Hb_005181_110 Hb_005181_110 Hb_002276_060--Hb_005181_110 Hb_000679_020 Hb_000679_020 Hb_000661_030--Hb_000679_020 Hb_001259_020 Hb_001259_020 Hb_000661_030--Hb_001259_020 Hb_000027_190 Hb_000027_190 Hb_000661_030--Hb_000027_190 Hb_000661_030--Hb_188126_010 Hb_000815_170 Hb_000815_170 Hb_000661_030--Hb_000815_170 Hb_000906_100 Hb_000906_100 Hb_000661_030--Hb_000906_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.30877 1.23851 0.491243 0.608599 2.28925 2.60986
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.50331 0.937708 2.09865 1.93553 3.66499

CAGE analysis