Hb_146023_010

Information

Type -
Description -
Location Contig146023: 396-965
Sequence    

Annotation

kegg
ID rcu:RCOM_1318870
description serine-threonine protein kinase, plant-type, putative (EC:1.3.1.74)
nr
ID XP_002529272.1
description serine-threonine protein kinase, plant-type, putative [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9STF3
description Serine-threonine protein kinase, plant-type, putative OS=Ricinus communis GN=RCOM_1318870 PE=3 SV=1
Gene Ontology
ID GO:0016021
description receptor-like protein kinase at3g47110

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_146023_010 0.0 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
2 Hb_010712_020 0.0834402366 - - PREDICTED: caffeic acid 3-O-methyltransferase-like [Jatropha curcas]
3 Hb_064398_010 0.0880801577 - - cytochrome P450, putative [Ricinus communis]
4 Hb_176979_010 0.091107743 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
5 Hb_002917_010 0.0920838217 - - PREDICTED: receptor-like protein kinase HSL1 [Jatropha curcas]
6 Hb_000939_030 0.0945996027 - - PREDICTED: F-box protein At3g07870-like [Jatropha curcas]
7 Hb_001047_250 0.0991121635 - - PREDICTED: ent-copalyl diphosphate synthase, chloroplastic [Jatropha curcas]
8 Hb_001863_290 0.0999957151 - - PREDICTED: 7-deoxyloganetin glucosyltransferase-like [Jatropha curcas]
9 Hb_001442_080 0.1002638461 transcription factor TF Family: MYB-related transcription factor MYB251 [Fagus crenata]
10 Hb_011824_010 0.1014088172 - - Metalloendoproteinase 1 precursor, putative [Ricinus communis]
11 Hb_107258_010 0.1031269287 - - hypothetical protein JCGZ_01141 [Jatropha curcas]
12 Hb_001141_170 0.1118525213 - - PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Jatropha curcas]
13 Hb_000487_170 0.1152923509 transcription factor TF Family: NAC NAC domain-containing protein, putative [Ricinus communis]
14 Hb_000189_260 0.1157349297 - - conserved hypothetical protein [Ricinus communis]
15 Hb_004564_010 0.1237552068 - - receptor-kinase, putative [Ricinus communis]
16 Hb_012660_010 0.1259637932 - - hypothetical protein JCGZ_25971 [Jatropha curcas]
17 Hb_016172_010 0.1259784453 - - hypothetical protein JCGZ_23602 [Jatropha curcas]
18 Hb_000160_230 0.1259914734 transcription factor TF Family: MYB PREDICTED: transcription factor MYB3-like [Jatropha curcas]
19 Hb_064885_050 0.1261038472 - - PREDICTED: BAHD acyltransferase At5g47980-like [Populus euphratica]
20 Hb_007810_140 0.1267581982 - - Ankyrin repeat-containing protein [Medicago truncatula]

Gene co-expression network

sample Hb_146023_010 Hb_146023_010 Hb_010712_020 Hb_010712_020 Hb_146023_010--Hb_010712_020 Hb_064398_010 Hb_064398_010 Hb_146023_010--Hb_064398_010 Hb_176979_010 Hb_176979_010 Hb_146023_010--Hb_176979_010 Hb_002917_010 Hb_002917_010 Hb_146023_010--Hb_002917_010 Hb_000939_030 Hb_000939_030 Hb_146023_010--Hb_000939_030 Hb_001047_250 Hb_001047_250 Hb_146023_010--Hb_001047_250 Hb_011824_010 Hb_011824_010 Hb_010712_020--Hb_011824_010 Hb_001863_290 Hb_001863_290 Hb_010712_020--Hb_001863_290 Hb_001141_170 Hb_001141_170 Hb_010712_020--Hb_001141_170 Hb_000160_230 Hb_000160_230 Hb_010712_020--Hb_000160_230 Hb_007810_140 Hb_007810_140 Hb_010712_020--Hb_007810_140 Hb_010712_020--Hb_064398_010 Hb_064398_010--Hb_001863_290 Hb_001442_080 Hb_001442_080 Hb_064398_010--Hb_001442_080 Hb_000487_170 Hb_000487_170 Hb_064398_010--Hb_000487_170 Hb_064398_010--Hb_001141_170 Hb_107258_010 Hb_107258_010 Hb_064398_010--Hb_107258_010 Hb_064885_050 Hb_064885_050 Hb_176979_010--Hb_064885_050 Hb_125644_010 Hb_125644_010 Hb_176979_010--Hb_125644_010 Hb_176979_010--Hb_002917_010 Hb_176979_010--Hb_001442_080 Hb_176979_010--Hb_000939_030 Hb_001357_260 Hb_001357_260 Hb_002917_010--Hb_001357_260 Hb_000189_260 Hb_000189_260 Hb_002917_010--Hb_000189_260 Hb_000976_020 Hb_000976_020 Hb_002917_010--Hb_000976_020 Hb_002965_020 Hb_002965_020 Hb_002917_010--Hb_002965_020 Hb_002917_010--Hb_064398_010 Hb_000939_030--Hb_000976_020 Hb_000939_030--Hb_010712_020 Hb_000939_030--Hb_107258_010 Hb_000140_260 Hb_000140_260 Hb_000939_030--Hb_000140_260 Hb_002110_270 Hb_002110_270 Hb_000939_030--Hb_002110_270 Hb_001080_310 Hb_001080_310 Hb_001047_250--Hb_001080_310 Hb_001999_220 Hb_001999_220 Hb_001047_250--Hb_001999_220 Hb_001047_250--Hb_010712_020 Hb_001047_250--Hb_001141_170 Hb_002311_050 Hb_002311_050 Hb_001047_250--Hb_002311_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.96602 0.104856 0.321324 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.195453 11.3497 0.215439

CAGE analysis