Hb_146224_010

Information

Type -
Description -
Location Contig146224: 263-861
Sequence    

Annotation

kegg
ID rcu:RCOM_0530670
description hypothetical protein
nr
ID XP_002526926.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9SLQ7
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0530670 PE=4 SV=1
Gene Ontology
ID GO:0005622
description gpi inositol-deacylase-like isoform x2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_146224_010 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_001001_150 0.0695759291 - - conserved hypothetical protein [Ricinus communis]
3 Hb_012490_090 0.0802033772 - - PREDICTED: myosin-17 [Jatropha curcas]
4 Hb_000313_120 0.0923759446 - - PREDICTED: ALG-2 interacting protein X [Jatropha curcas]
5 Hb_002260_050 0.096319506 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000115_160 0.0973995068 - - PREDICTED: pentatricopeptide repeat-containing protein At3g29230 [Jatropha curcas]
7 Hb_000215_140 0.0974876665 - - PREDICTED: phosphoinositide 3-kinase regulatory subunit 4-like [Malus domestica]
8 Hb_000473_110 0.1006333611 - - PREDICTED: PP2A regulatory subunit TAP46 [Jatropha curcas]
9 Hb_001221_080 0.1016511064 - - PREDICTED: conserved oligomeric Golgi complex subunit 2 isoform X2 [Jatropha curcas]
10 Hb_006420_040 0.1053590958 transcription factor TF Family: Orphans PREDICTED: paired amphipathic helix protein Sin3-like 4 isoform X2 [Jatropha curcas]
11 Hb_021297_050 0.1074282917 - - PREDICTED: signal recognition particle receptor subunit alpha [Jatropha curcas]
12 Hb_001550_060 0.107947323 - - PREDICTED: serine/threonine-protein phosphatase BSL3 isoform X4 [Jatropha curcas]
13 Hb_000731_270 0.1080196264 - - PREDICTED: polyadenylate-binding protein RBP45B isoform X1 [Jatropha curcas]
14 Hb_000667_030 0.1095785729 - - PREDICTED: protein transport protein SEC23-like [Jatropha curcas]
15 Hb_000035_170 0.1098307477 - - PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like [Jatropha curcas]
16 Hb_000494_070 0.1110806256 - - PREDICTED: protein ARABIDILLO 1-like [Jatropha curcas]
17 Hb_003058_260 0.1121367447 - - hypothetical protein POPTR_0003s13040g [Populus trichocarpa]
18 Hb_000014_050 0.1127870168 - - PREDICTED: V-type proton ATPase subunit B 2 [Elaeis guineensis]
19 Hb_004117_100 0.1134973606 - - Vacuolar sorting receptor 1 precursor, putative [Ricinus communis]
20 Hb_003645_060 0.1135206223 - - PREDICTED: monodehydroascorbate reductase, chloroplastic [Jatropha curcas]

Gene co-expression network

sample Hb_146224_010 Hb_146224_010 Hb_001001_150 Hb_001001_150 Hb_146224_010--Hb_001001_150 Hb_012490_090 Hb_012490_090 Hb_146224_010--Hb_012490_090 Hb_000313_120 Hb_000313_120 Hb_146224_010--Hb_000313_120 Hb_002260_050 Hb_002260_050 Hb_146224_010--Hb_002260_050 Hb_000115_160 Hb_000115_160 Hb_146224_010--Hb_000115_160 Hb_000215_140 Hb_000215_140 Hb_146224_010--Hb_000215_140 Hb_002641_130 Hb_002641_130 Hb_001001_150--Hb_002641_130 Hb_000035_170 Hb_000035_170 Hb_001001_150--Hb_000035_170 Hb_000573_060 Hb_000573_060 Hb_001001_150--Hb_000573_060 Hb_000473_110 Hb_000473_110 Hb_001001_150--Hb_000473_110 Hb_001318_070 Hb_001318_070 Hb_001001_150--Hb_001318_070 Hb_012490_090--Hb_000215_140 Hb_012490_090--Hb_000313_120 Hb_012490_090--Hb_002260_050 Hb_001217_050 Hb_001217_050 Hb_012490_090--Hb_001217_050 Hb_013358_010 Hb_013358_010 Hb_012490_090--Hb_013358_010 Hb_000789_250 Hb_000789_250 Hb_000313_120--Hb_000789_250 Hb_003058_260 Hb_003058_260 Hb_000313_120--Hb_003058_260 Hb_001628_070 Hb_001628_070 Hb_000313_120--Hb_001628_070 Hb_000313_120--Hb_000215_140 Hb_000317_370 Hb_000317_370 Hb_000313_120--Hb_000317_370 Hb_000412_010 Hb_000412_010 Hb_000313_120--Hb_000412_010 Hb_001322_130 Hb_001322_130 Hb_002260_050--Hb_001322_130 Hb_004410_120 Hb_004410_120 Hb_002260_050--Hb_004410_120 Hb_000174_290 Hb_000174_290 Hb_002260_050--Hb_000174_290 Hb_002260_050--Hb_013358_010 Hb_004553_030 Hb_004553_030 Hb_002260_050--Hb_004553_030 Hb_028872_170 Hb_028872_170 Hb_000115_160--Hb_028872_170 Hb_158604_010 Hb_158604_010 Hb_000115_160--Hb_158604_010 Hb_000101_350 Hb_000101_350 Hb_000115_160--Hb_000101_350 Hb_000115_160--Hb_002260_050 Hb_001440_040 Hb_001440_040 Hb_000115_160--Hb_001440_040 Hb_000215_140--Hb_000412_010 Hb_000720_130 Hb_000720_130 Hb_000215_140--Hb_000720_130 Hb_000230_260 Hb_000230_260 Hb_000215_140--Hb_000230_260 Hb_001963_100 Hb_001963_100 Hb_000215_140--Hb_001963_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.11668 2.38588 1.98043 1.60953 3.35962 1.87028
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.27048 0.887151 2.98657 2.31188 2.26457

CAGE analysis