Hb_146255_010

Information

Type -
Description -
Location Contig146255: 10374-10677
Sequence    

Annotation

kegg
ID pop:POPTR_0010s00660g
description POPTRDRAFT_725575; hypothetical protein
nr
ID XP_012084229.1
description PREDICTED: uncharacterized protein LOC105643649 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K874
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19104 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_146255_010 0.0 - - PREDICTED: uncharacterized protein LOC105643649 [Jatropha curcas]
2 Hb_000313_080 0.0867468367 rubber biosynthesis Gene Name: CPT3 cis-prenyltransferase 3 [Hevea brasiliensis]
3 Hb_002374_540 0.0881376922 - - RecName: Full=Esterase; AltName: Full=Early nodule-specific protein homolog; AltName: Full=Latex allergen Hev b 13; AltName: Allergen=Hev b 13; Flags: Precursor [Hevea brasiliensis]
4 Hb_001887_010 0.1410877632 - - mta/sah nucleosidase, putative [Ricinus communis]
5 Hb_000392_060 0.1470501928 - - hypothetical protein JCGZ_11629 [Jatropha curcas]
6 Hb_003685_070 0.1498471789 - - RecName: Full=(S)-hydroxynitrile lyase; AltName: Full=(S)-acetone-cyanohydrin lyase; AltName: Full=Oxynitrilase [Hevea brasiliensis]
7 Hb_006061_030 0.1593683131 - - PREDICTED: fe(2+) transport protein 1-like [Jatropha curcas]
8 Hb_001741_110 0.159923194 rubber biosynthesis Gene Name: REF7 REF/SRPP-like protein [Glycine soja]
9 Hb_005357_170 0.1625288098 - - Pectinesterase precursor, putative [Ricinus communis]
10 Hb_000087_010 0.1667467262 - - mta/sah nucleosidase, putative [Ricinus communis]
11 Hb_003765_010 0.1699116863 - - berberine bridge enzyme [Hevea brasiliensis]
12 Hb_007007_140 0.1752510921 transcription factor TF Family: MIKC PREDICTED: agamous-like MADS-box protein AGL6 [Jatropha curcas]
13 Hb_000331_380 0.1752670423 - - hypothetical protein POPTR_0012s09560g [Populus trichocarpa]
14 Hb_004396_020 0.1755311065 - - SAUR-like auxin-responsive protein family [Theobroma cacao]
15 Hb_024066_020 0.1777331847 - - P66 protein [Hevea brasiliensis]
16 Hb_150179_010 0.1790745269 - - hypothetical protein JCGZ_21079 [Jatropha curcas]
17 Hb_000352_210 0.1792471714 - - PREDICTED: xyloglucan endotransglucosylase/hydrolase 1 [Jatropha curcas]
18 Hb_002073_210 0.1798769687 - - conserved hypothetical protein [Ricinus communis]
19 Hb_004732_080 0.1799492199 - - PREDICTED: germin-like protein subfamily 3 member 2 [Populus euphratica]
20 Hb_004690_020 0.1802777416 - - PREDICTED: MLP-like protein 328 [Jatropha curcas]

Gene co-expression network

sample Hb_146255_010 Hb_146255_010 Hb_000313_080 Hb_000313_080 Hb_146255_010--Hb_000313_080 Hb_002374_540 Hb_002374_540 Hb_146255_010--Hb_002374_540 Hb_001887_010 Hb_001887_010 Hb_146255_010--Hb_001887_010 Hb_000392_060 Hb_000392_060 Hb_146255_010--Hb_000392_060 Hb_003685_070 Hb_003685_070 Hb_146255_010--Hb_003685_070 Hb_006061_030 Hb_006061_030 Hb_146255_010--Hb_006061_030 Hb_000313_080--Hb_003685_070 Hb_005357_170 Hb_005357_170 Hb_000313_080--Hb_005357_170 Hb_000313_080--Hb_001887_010 Hb_000313_080--Hb_006061_030 Hb_015978_020 Hb_015978_020 Hb_000313_080--Hb_015978_020 Hb_001741_110 Hb_001741_110 Hb_002374_540--Hb_001741_110 Hb_002374_540--Hb_000313_080 Hb_000087_010 Hb_000087_010 Hb_002374_540--Hb_000087_010 Hb_001396_270 Hb_001396_270 Hb_002374_540--Hb_001396_270 Hb_002374_540--Hb_005357_170 Hb_001887_010--Hb_003685_070 Hb_150179_010 Hb_150179_010 Hb_001887_010--Hb_150179_010 Hb_001557_030 Hb_001557_030 Hb_001887_010--Hb_001557_030 Hb_003765_010 Hb_003765_010 Hb_001887_010--Hb_003765_010 Hb_001887_010--Hb_005357_170 Hb_002073_210 Hb_002073_210 Hb_001887_010--Hb_002073_210 Hb_141096_010 Hb_141096_010 Hb_000392_060--Hb_141096_010 Hb_011081_010 Hb_011081_010 Hb_000392_060--Hb_011081_010 Hb_000392_060--Hb_000313_080 Hb_133926_010 Hb_133926_010 Hb_000392_060--Hb_133926_010 Hb_000392_060--Hb_015978_020 Hb_003685_070--Hb_150179_010 Hb_011224_030 Hb_011224_030 Hb_003685_070--Hb_011224_030 Hb_007007_140 Hb_007007_140 Hb_003685_070--Hb_007007_140 Hb_003685_070--Hb_005357_170 Hb_024066_020 Hb_024066_020 Hb_003685_070--Hb_024066_020 Hb_005614_060 Hb_005614_060 Hb_006061_030--Hb_005614_060 Hb_000049_190 Hb_000049_190 Hb_006061_030--Hb_000049_190 Hb_005665_100 Hb_005665_100 Hb_006061_030--Hb_005665_100 Hb_004899_230 Hb_004899_230 Hb_006061_030--Hb_004899_230 Hb_001568_040 Hb_001568_040 Hb_006061_030--Hb_001568_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.934829 0 1.34335 13.0291 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 1.0113

CAGE analysis