Hb_146339_010

Information

Type -
Description -
Location Contig146339: 1722-3530
Sequence    

Annotation

kegg
ID bvg:104900936
description uncharacterized LOC104900936
nr
ID KDP42289.1
description hypothetical protein JCGZ_01613 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LDZ6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01613 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_146339_010 0.0 - - hypothetical protein JCGZ_01613 [Jatropha curcas]
2 Hb_063943_010 0.132407085 - - PREDICTED: box C/D snoRNA protein 1 [Jatropha curcas]
3 Hb_183443_010 0.169145293 - - PREDICTED: uncharacterized protein LOC105786773 [Gossypium raimondii]
4 Hb_003059_010 0.1852291376 - - PREDICTED: uncharacterized protein LOC104236538 [Nicotiana sylvestris]
5 Hb_089206_010 0.2057374997 - - PREDICTED: receptor-like protein kinase FERONIA [Jatropha curcas]
6 Hb_003175_110 0.2068047457 - - -
7 Hb_000714_040 0.2101935049 - - PREDICTED: uncharacterized protein LOC105634664 isoform X2 [Jatropha curcas]
8 Hb_002851_080 0.213960046 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Jatropha curcas]
9 Hb_000032_470 0.2178847511 - - PREDICTED: uncharacterized protein LOC103415826 [Malus domestica]
10 Hb_004254_110 0.2181434015 - - -
11 Hb_001440_040 0.2225665029 - - hypothetical protein POPTR_0008s03520g [Populus trichocarpa]
12 Hb_001912_080 0.2248556903 - - vacuolar protein sorting-associated protein, putative [Ricinus communis]
13 Hb_000959_090 0.2300976178 - - conserved hypothetical protein [Ricinus communis]
14 Hb_011609_150 0.2307063032 - - PREDICTED: HEAT repeat-containing protein 5B [Jatropha curcas]
15 Hb_000574_360 0.231526821 - - PREDICTED: formamidopyrimidine-DNA glycosylase-like isoform X1 [Vitis vinifera]
16 Hb_104812_010 0.2333592483 - - PREDICTED: mediator of RNA polymerase II transcription subunit 9 [Populus euphratica]
17 Hb_000883_030 0.2341196829 - - PREDICTED: uncharacterized protein LOC105636683 [Jatropha curcas]
18 Hb_003211_040 0.2354025406 - - PREDICTED: uncharacterized protein LOC105634664 isoform X1 [Jatropha curcas]
19 Hb_099270_030 0.2359152749 transcription factor TF Family: PHD PREDICTED: protein CHROMATIN REMODELING 4 isoform X2 [Jatropha curcas]
20 Hb_003805_070 0.2378809489 - - PREDICTED: sacsin [Jatropha curcas]

Gene co-expression network

sample Hb_146339_010 Hb_146339_010 Hb_063943_010 Hb_063943_010 Hb_146339_010--Hb_063943_010 Hb_183443_010 Hb_183443_010 Hb_146339_010--Hb_183443_010 Hb_003059_010 Hb_003059_010 Hb_146339_010--Hb_003059_010 Hb_089206_010 Hb_089206_010 Hb_146339_010--Hb_089206_010 Hb_003175_110 Hb_003175_110 Hb_146339_010--Hb_003175_110 Hb_000714_040 Hb_000714_040 Hb_146339_010--Hb_000714_040 Hb_063943_010--Hb_003059_010 Hb_063943_010--Hb_089206_010 Hb_063943_010--Hb_003175_110 Hb_063943_010--Hb_183443_010 Hb_003124_030 Hb_003124_030 Hb_063943_010--Hb_003124_030 Hb_183443_010--Hb_089206_010 Hb_000566_030 Hb_000566_030 Hb_183443_010--Hb_000566_030 Hb_000334_180 Hb_000334_180 Hb_183443_010--Hb_000334_180 Hb_174473_010 Hb_174473_010 Hb_183443_010--Hb_174473_010 Hb_003059_010--Hb_003124_030 Hb_001221_140 Hb_001221_140 Hb_003059_010--Hb_001221_140 Hb_000077_220 Hb_000077_220 Hb_003059_010--Hb_000077_220 Hb_002851_080 Hb_002851_080 Hb_003059_010--Hb_002851_080 Hb_007333_030 Hb_007333_030 Hb_003059_010--Hb_007333_030 Hb_000357_120 Hb_000357_120 Hb_089206_010--Hb_000357_120 Hb_003688_160 Hb_003688_160 Hb_089206_010--Hb_003688_160 Hb_052689_010 Hb_052689_010 Hb_089206_010--Hb_052689_010 Hb_004097_120 Hb_004097_120 Hb_089206_010--Hb_004097_120 Hb_113673_010 Hb_113673_010 Hb_003175_110--Hb_113673_010 Hb_001266_120 Hb_001266_120 Hb_003175_110--Hb_001266_120 Hb_085083_020 Hb_085083_020 Hb_003175_110--Hb_085083_020 Hb_003175_110--Hb_003124_030 Hb_005488_170 Hb_005488_170 Hb_000714_040--Hb_005488_170 Hb_000815_170 Hb_000815_170 Hb_000714_040--Hb_000815_170 Hb_013459_010 Hb_013459_010 Hb_000714_040--Hb_013459_010 Hb_003119_080 Hb_003119_080 Hb_000714_040--Hb_003119_080 Hb_099270_030 Hb_099270_030 Hb_000714_040--Hb_099270_030 Hb_005348_010 Hb_005348_010 Hb_000714_040--Hb_005348_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0351132 0.0483714 0.0178674 0.0176 0.0703434 0.0446721
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.079118 0.0584403 0.0881381

CAGE analysis