Hb_146902_010

Information

Type -
Description -
Location Contig146902: 4365-4655
Sequence    

Annotation

kegg
ID rcu:RCOM_1255460
description hypothetical protein
nr
ID XP_002525769.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9SIF0
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1255460 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_146902_010 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_001541_220 0.0719200205 transcription factor TF Family: ERF hypothetical protein RCOM_0793640 [Ricinus communis]
3 Hb_119808_020 0.1705266023 - - PREDICTED: premnaspirodiene oxygenase-like [Vitis vinifera]
4 Hb_008971_030 0.173680365 - - conserved hypothetical protein [Ricinus communis]
5 Hb_011316_140 0.2026696465 - - PREDICTED: uncharacterized protein LOC105129591 [Populus euphratica]
6 Hb_067034_020 0.2030859424 - - PREDICTED: iridoid synthase [Jatropha curcas]
7 Hb_000284_280 0.2115904624 - - -
8 Hb_013654_030 0.2160634821 - - Dehydration-responsive protein RD22 precursor, putative [Ricinus communis]
9 Hb_000281_050 0.21607407 - - PREDICTED: subtilisin-like protease SBT3.5 isoform X2 [Populus euphratica]
10 Hb_000302_350 0.2483191223 - - polygalacturonase, putative [Ricinus communis]
11 Hb_011476_020 0.2491457992 - - PREDICTED: glutamate dehydrogenase 2-like [Jatropha curcas]
12 Hb_159327_010 0.2590547296 - - hypothetical protein JCGZ_23768 [Jatropha curcas]
13 Hb_000111_440 0.2642447579 - - -
14 Hb_000896_070 0.2645721446 - - ammonium transporter, putative [Ricinus communis]
15 Hb_000740_020 0.2752949577 transcription factor TF Family: MYB-related asymmetric leaves1 and rough sheath, putative [Ricinus communis]
16 Hb_007441_140 0.276530216 - - PREDICTED: cyclin-U4-1 [Jatropha curcas]
17 Hb_135592_010 0.2779615014 - - conserved hypothetical protein [Ricinus communis]
18 Hb_001431_100 0.2810722937 - - PREDICTED: probable protein phosphatase 2C 27 [Jatropha curcas]
19 Hb_028447_010 0.2827587909 - - hypothetical protein RCOM_1967580 [Ricinus communis]
20 Hb_004586_100 0.2827596767 - - PREDICTED: uncharacterized protein LOC105120428 isoform X2 [Populus euphratica]

Gene co-expression network

sample Hb_146902_010 Hb_146902_010 Hb_001541_220 Hb_001541_220 Hb_146902_010--Hb_001541_220 Hb_119808_020 Hb_119808_020 Hb_146902_010--Hb_119808_020 Hb_008971_030 Hb_008971_030 Hb_146902_010--Hb_008971_030 Hb_011316_140 Hb_011316_140 Hb_146902_010--Hb_011316_140 Hb_067034_020 Hb_067034_020 Hb_146902_010--Hb_067034_020 Hb_000284_280 Hb_000284_280 Hb_146902_010--Hb_000284_280 Hb_001541_220--Hb_119808_020 Hb_001541_220--Hb_067034_020 Hb_001541_220--Hb_011316_140 Hb_013654_030 Hb_013654_030 Hb_001541_220--Hb_013654_030 Hb_001541_220--Hb_008971_030 Hb_029508_020 Hb_029508_020 Hb_119808_020--Hb_029508_020 Hb_000541_030 Hb_000541_030 Hb_119808_020--Hb_000541_030 Hb_091537_010 Hb_091537_010 Hb_119808_020--Hb_091537_010 Hb_119808_020--Hb_013654_030 Hb_000281_050 Hb_000281_050 Hb_119808_020--Hb_000281_050 Hb_000111_440 Hb_000111_440 Hb_008971_030--Hb_000111_440 Hb_001431_100 Hb_001431_100 Hb_008971_030--Hb_001431_100 Hb_159327_010 Hb_159327_010 Hb_008971_030--Hb_159327_010 Hb_008971_030--Hb_119808_020 Hb_011316_140--Hb_119808_020 Hb_011316_140--Hb_013654_030 Hb_011316_140--Hb_000281_050 Hb_000350_040 Hb_000350_040 Hb_011316_140--Hb_000350_040 Hb_000836_150 Hb_000836_150 Hb_067034_020--Hb_000836_150 Hb_001102_310 Hb_001102_310 Hb_067034_020--Hb_001102_310 Hb_067034_020--Hb_119808_020 Hb_000740_020 Hb_000740_020 Hb_067034_020--Hb_000740_020 Hb_000866_100 Hb_000866_100 Hb_000284_280--Hb_000866_100 Hb_001946_090 Hb_001946_090 Hb_000284_280--Hb_001946_090 Hb_005065_090 Hb_005065_090 Hb_000284_280--Hb_005065_090 Hb_000760_090 Hb_000760_090 Hb_000284_280--Hb_000760_090 Hb_010543_010 Hb_010543_010 Hb_000284_280--Hb_010543_010 Hb_001488_170 Hb_001488_170 Hb_000284_280--Hb_001488_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.593242 1.20066 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.319056 0 0 0

CAGE analysis