Hb_147137_010

Information

Type -
Description -
Location Contig147137: 451-687
Sequence    

Annotation

kegg
ID pop:POPTR_0006s16210g
description hypothetical protein
nr
ID KDP33658.1
description hypothetical protein JCGZ_07229 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KF95
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07229 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_11920: 548-650
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_147137_010 0.0 - - hypothetical protein JCGZ_07229 [Jatropha curcas]
2 Hb_180293_010 0.1079410779 - - hypothetical protein POPTR_0008s19020g [Populus trichocarpa]
3 Hb_001232_170 0.1158757082 - - sulfate transporter, putative [Ricinus communis]
4 Hb_170597_010 0.1227341553 - - hypothetical protein POPTR_0014s17480g [Populus trichocarpa]
5 Hb_003090_250 0.1253885086 - - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein isoform 1 [Theobroma cacao]
6 Hb_000201_060 0.1272678202 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g53440 isoform X2 [Populus euphratica]
7 Hb_000025_150 0.1304141964 transcription factor TF Family: HSF hypothetical protein POPTR_0001s28040g [Populus trichocarpa]
8 Hb_002232_340 0.1311757194 - - Sodium transporter hkt1-like protein, putative [Theobroma cacao]
9 Hb_000754_010 0.1316960342 - - unnamed protein product [Vitis vinifera]
10 Hb_001123_080 0.1320074662 - - conserved hypothetical protein [Ricinus communis]
11 Hb_004807_070 0.1349549957 - - hypothetical protein POPTR_0004s17330g, partial [Populus trichocarpa]
12 Hb_006452_080 0.1363374779 - - Nodulin, putative [Ricinus communis]
13 Hb_006061_020 0.1371147758 transcription factor TF Family: bZIP bZIP family protein [Populus trichocarpa]
14 Hb_006018_020 0.1388141115 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000816_170 0.1399304618 transcription factor TF Family: LOB PREDICTED: LOB domain-containing protein 15 [Jatropha curcas]
16 Hb_116679_010 0.141880308 - - PREDICTED: transcription factor bHLH110 isoform X2 [Vitis vinifera]
17 Hb_000012_340 0.1425943545 - - PREDICTED: inorganic pyrophosphatase 3-like [Jatropha curcas]
18 Hb_000358_070 0.1427271939 - - hypothetical protein POPTR_0003s01410g [Populus trichocarpa]
19 Hb_006618_060 0.1437837624 - - PREDICTED: 21 kDa protein [Jatropha curcas]
20 Hb_006275_080 0.1443099997 - - PREDICTED: protein WALLS ARE THIN 1 [Jatropha curcas]

Gene co-expression network

sample Hb_147137_010 Hb_147137_010 Hb_180293_010 Hb_180293_010 Hb_147137_010--Hb_180293_010 Hb_001232_170 Hb_001232_170 Hb_147137_010--Hb_001232_170 Hb_170597_010 Hb_170597_010 Hb_147137_010--Hb_170597_010 Hb_003090_250 Hb_003090_250 Hb_147137_010--Hb_003090_250 Hb_000201_060 Hb_000201_060 Hb_147137_010--Hb_000201_060 Hb_000025_150 Hb_000025_150 Hb_147137_010--Hb_000025_150 Hb_180293_010--Hb_000025_150 Hb_019299_010 Hb_019299_010 Hb_180293_010--Hb_019299_010 Hb_187906_010 Hb_187906_010 Hb_180293_010--Hb_187906_010 Hb_009851_120 Hb_009851_120 Hb_180293_010--Hb_009851_120 Hb_011930_090 Hb_011930_090 Hb_180293_010--Hb_011930_090 Hb_001401_110 Hb_001401_110 Hb_180293_010--Hb_001401_110 Hb_000628_070 Hb_000628_070 Hb_001232_170--Hb_000628_070 Hb_006018_020 Hb_006018_020 Hb_001232_170--Hb_006018_020 Hb_000816_170 Hb_000816_170 Hb_001232_170--Hb_000816_170 Hb_011344_110 Hb_011344_110 Hb_001232_170--Hb_011344_110 Hb_001123_080 Hb_001123_080 Hb_001232_170--Hb_001123_080 Hb_014881_020 Hb_014881_020 Hb_001232_170--Hb_014881_020 Hb_116679_010 Hb_116679_010 Hb_170597_010--Hb_116679_010 Hb_006275_080 Hb_006275_080 Hb_170597_010--Hb_006275_080 Hb_011689_090 Hb_011689_090 Hb_170597_010--Hb_011689_090 Hb_002232_340 Hb_002232_340 Hb_170597_010--Hb_002232_340 Hb_006452_080 Hb_006452_080 Hb_170597_010--Hb_006452_080 Hb_003607_040 Hb_003607_040 Hb_170597_010--Hb_003607_040 Hb_003090_250--Hb_000201_060 Hb_003090_250--Hb_006452_080 Hb_000754_010 Hb_000754_010 Hb_003090_250--Hb_000754_010 Hb_006061_020 Hb_006061_020 Hb_003090_250--Hb_006061_020 Hb_029508_050 Hb_029508_050 Hb_003090_250--Hb_029508_050 Hb_000358_070 Hb_000358_070 Hb_003090_250--Hb_000358_070 Hb_000201_060--Hb_000754_010 Hb_000201_060--Hb_000358_070 Hb_000201_060--Hb_006061_020 Hb_000201_060--Hb_029508_050 Hb_000201_060--Hb_006452_080 Hb_000438_180 Hb_000438_180 Hb_000025_150--Hb_000438_180 Hb_000025_150--Hb_001401_110 Hb_001584_250 Hb_001584_250 Hb_000025_150--Hb_001584_250 Hb_001269_430 Hb_001269_430 Hb_000025_150--Hb_001269_430 Hb_004807_070 Hb_004807_070 Hb_000025_150--Hb_004807_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.15405 0.682066 20.2092 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.594679 0 0 0.774763

CAGE analysis