Hb_147245_010

Information

Type -
Description -
Location Contig147245: 100-1454
Sequence    

Annotation

kegg
ID rcu:RCOM_1121690
description casein kinase, putative
nr
ID XP_002525432.1
description casein kinase, putative [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9SHG2
description Casein kinase, putative OS=Ricinus communis GN=RCOM_1121690 PE=3 SV=1
Gene Ontology
ID GO:0004674
description casein kinase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_147245_010 0.0 - - casein kinase, putative [Ricinus communis]
2 Hb_002235_060 0.085328979 - - plastocyanin-like domain-containing family protein [Populus trichocarpa]
3 Hb_001545_130 0.0867830161 - - sur2 hydroxylase/desaturase, putative [Ricinus communis]
4 Hb_007537_030 0.1026141209 - - PREDICTED: gamma aminobutyrate transaminase 3, chloroplastic [Jatropha curcas]
5 Hb_000928_120 0.1054379734 - - PREDICTED: benzyl alcohol O-benzoyltransferase-like [Jatropha curcas]
6 Hb_004109_050 0.1062424047 - - PREDICTED: putative callose synthase 8 [Jatropha curcas]
7 Hb_000152_710 0.1200291419 - - PREDICTED: putative glycerol-3-phosphate transporter 1 [Jatropha curcas]
8 Hb_003371_070 0.1204622474 - - PREDICTED: citrate synthase, mitochondrial [Jatropha curcas]
9 Hb_000740_090 0.1213210066 - - conserved hypothetical protein [Ricinus communis]
10 Hb_018845_010 0.1218309892 - - PREDICTED: uncharacterized protein LOC105642055 [Jatropha curcas]
11 Hb_004522_030 0.123893918 - - PREDICTED: 6-phosphogluconate dehydrogenase, decarboxylating 3 [Jatropha curcas]
12 Hb_019280_020 0.1240093732 - - PREDICTED: proline-rich receptor-like protein kinase PERK14 isoform X1 [Jatropha curcas]
13 Hb_012362_030 0.1287661782 - - PREDICTED: GPI-anchored protein LORELEI-like [Populus euphratica]
14 Hb_003710_020 0.1296529003 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g53440 isoform X1 [Jatropha curcas]
15 Hb_048476_060 0.1305498432 - - PREDICTED: CRAL-TRIO domain-containing protein YKL091C-like isoform X2 [Jatropha curcas]
16 Hb_000062_660 0.1306543448 - - hypothetical protein POPTR_0009s03470g [Populus trichocarpa]
17 Hb_006351_020 0.1309285628 - - PREDICTED: L-type lectin-domain containing receptor kinase S.4-like [Jatropha curcas]
18 Hb_000062_530 0.1327271849 - - PREDICTED: GDP-mannose transporter GONST3-like [Populus euphratica]
19 Hb_021576_070 0.1330612584 - - hypothetical protein PRUPE_ppa002736mg [Prunus persica]
20 Hb_000696_070 0.1333353594 - - PREDICTED: aspartic proteinase-like protein 1 [Jatropha curcas]

Gene co-expression network

sample Hb_147245_010 Hb_147245_010 Hb_002235_060 Hb_002235_060 Hb_147245_010--Hb_002235_060 Hb_001545_130 Hb_001545_130 Hb_147245_010--Hb_001545_130 Hb_007537_030 Hb_007537_030 Hb_147245_010--Hb_007537_030 Hb_000928_120 Hb_000928_120 Hb_147245_010--Hb_000928_120 Hb_004109_050 Hb_004109_050 Hb_147245_010--Hb_004109_050 Hb_000152_710 Hb_000152_710 Hb_147245_010--Hb_000152_710 Hb_002374_270 Hb_002374_270 Hb_002235_060--Hb_002374_270 Hb_000922_320 Hb_000922_320 Hb_002235_060--Hb_000922_320 Hb_000000_480 Hb_000000_480 Hb_002235_060--Hb_000000_480 Hb_002325_060 Hb_002325_060 Hb_002235_060--Hb_002325_060 Hb_002235_060--Hb_000928_120 Hb_004218_130 Hb_004218_130 Hb_001545_130--Hb_004218_130 Hb_000003_030 Hb_000003_030 Hb_001545_130--Hb_000003_030 Hb_001545_130--Hb_004109_050 Hb_006351_020 Hb_006351_020 Hb_001545_130--Hb_006351_020 Hb_004032_210 Hb_004032_210 Hb_001545_130--Hb_004032_210 Hb_000570_020 Hb_000570_020 Hb_007537_030--Hb_000570_020 Hb_000157_140 Hb_000157_140 Hb_007537_030--Hb_000157_140 Hb_004030_060 Hb_004030_060 Hb_007537_030--Hb_004030_060 Hb_018845_010 Hb_018845_010 Hb_007537_030--Hb_018845_010 Hb_021576_070 Hb_021576_070 Hb_007537_030--Hb_021576_070 Hb_004326_010 Hb_004326_010 Hb_007537_030--Hb_004326_010 Hb_004522_030 Hb_004522_030 Hb_000928_120--Hb_004522_030 Hb_000283_140 Hb_000283_140 Hb_000928_120--Hb_000283_140 Hb_003001_130 Hb_003001_130 Hb_000928_120--Hb_003001_130 Hb_000622_330 Hb_000622_330 Hb_000928_120--Hb_000622_330 Hb_000928_120--Hb_000570_020 Hb_000928_120--Hb_007537_030 Hb_004109_050--Hb_021576_070 Hb_004109_050--Hb_000152_710 Hb_001754_020 Hb_001754_020 Hb_004109_050--Hb_001754_020 Hb_004109_050--Hb_000570_020 Hb_000395_110 Hb_000395_110 Hb_004109_050--Hb_000395_110 Hb_000152_710--Hb_021576_070 Hb_000152_710--Hb_007537_030 Hb_000152_710--Hb_001545_130 Hb_019280_020 Hb_019280_020 Hb_000152_710--Hb_019280_020 Hb_000494_030 Hb_000494_030 Hb_000152_710--Hb_000494_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
8.33724 29.125 47.2242 117.855 6.84156 7.90094
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
21.1028 15.1376 13.2918 37.4951 36.9095

CAGE analysis