Hb_147604_010

Information

Type -
Description -
Location Contig147604: 276-9502
Sequence    

Annotation

kegg
ID sbi:SORBI_05g007360
description SORBIDRAFT_05g007360, Sb05g007360; hypothetical protein
nr
ID XP_012073065.1
description PREDICTED: uncharacterized protein LOC105634770 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A022PVK1
description Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a018902mg PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_147604_010 0.0 - - PREDICTED: uncharacterized protein LOC105634770 [Jatropha curcas]
2 Hb_002598_030 0.0339394858 - - -
3 Hb_001542_010 0.086366098 - - hypothetical protein, partial [Pseudomonas fluorescens]
4 Hb_144838_010 0.1343160277 - - hypothetical protein JCGZ_08246 [Jatropha curcas]
5 Hb_000432_020 0.1360726006 desease resistance Gene Name: Tropomyosin_1 PREDICTED: putative disease resistance protein RGA1 isoform X2 [Jatropha curcas]
6 Hb_001250_030 0.1505027226 - - conserved hypothetical protein [Ricinus communis]
7 Hb_004445_030 0.1512245981 - - conserved hypothetical protein [Ricinus communis]
8 Hb_008680_010 0.1545434624 - - -
9 Hb_006616_070 0.1566124329 - - PREDICTED: uncharacterized protein LOC104894399 [Beta vulgaris subsp. vulgaris]
10 Hb_093388_010 0.1567444085 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1 [Jatropha curcas]
11 Hb_001490_020 0.1667151614 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
12 Hb_151401_010 0.1670480233 - - -
13 Hb_003414_040 0.1674967823 - - hypothetical protein VITISV_016691 [Vitis vinifera]
14 Hb_000450_110 0.1677267927 - - hypothetical protein PRUPE_ppa021229mg [Prunus persica]
15 Hb_006827_010 0.1726527775 - - retrotransposon protein, putative, unclassified, expressed [Oryza sativa Japonica Group]
16 Hb_007575_010 0.1729237403 - - PREDICTED: cytochrome P450 71A1 [Vitis vinifera]
17 Hb_007533_050 0.1732953053 - - -
18 Hb_054127_020 0.1734980143 - - TRANSPARENT TESTA 12 protein, putative [Ricinus communis]
19 Hb_001267_020 0.1751757061 - - PREDICTED: uncharacterized protein LOC105634770 [Jatropha curcas]
20 Hb_149345_010 0.1753528761 - - Anthranilate N-benzoyltransferase protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_147604_010 Hb_147604_010 Hb_002598_030 Hb_002598_030 Hb_147604_010--Hb_002598_030 Hb_001542_010 Hb_001542_010 Hb_147604_010--Hb_001542_010 Hb_144838_010 Hb_144838_010 Hb_147604_010--Hb_144838_010 Hb_000432_020 Hb_000432_020 Hb_147604_010--Hb_000432_020 Hb_001250_030 Hb_001250_030 Hb_147604_010--Hb_001250_030 Hb_004445_030 Hb_004445_030 Hb_147604_010--Hb_004445_030 Hb_002598_030--Hb_001542_010 Hb_002598_030--Hb_144838_010 Hb_002598_030--Hb_001250_030 Hb_002598_030--Hb_000432_020 Hb_008680_010 Hb_008680_010 Hb_002598_030--Hb_008680_010 Hb_002447_100 Hb_002447_100 Hb_001542_010--Hb_002447_100 Hb_149345_010 Hb_149345_010 Hb_001542_010--Hb_149345_010 Hb_001542_010--Hb_001250_030 Hb_003311_020 Hb_003311_020 Hb_001542_010--Hb_003311_020 Hb_007575_010 Hb_007575_010 Hb_144838_010--Hb_007575_010 Hb_017640_010 Hb_017640_010 Hb_144838_010--Hb_017640_010 Hb_000672_130 Hb_000672_130 Hb_144838_010--Hb_000672_130 Hb_144838_010--Hb_001250_030 Hb_007533_050 Hb_007533_050 Hb_000432_020--Hb_007533_050 Hb_003414_040 Hb_003414_040 Hb_000432_020--Hb_003414_040 Hb_000432_020--Hb_003311_020 Hb_093388_010 Hb_093388_010 Hb_000432_020--Hb_093388_010 Hb_151401_010 Hb_151401_010 Hb_000432_020--Hb_151401_010 Hb_000432_020--Hb_001250_030 Hb_001250_030--Hb_093388_010 Hb_029510_060 Hb_029510_060 Hb_001250_030--Hb_029510_060 Hb_023738_010 Hb_023738_010 Hb_001250_030--Hb_023738_010 Hb_001250_030--Hb_003311_020 Hb_001250_030--Hb_003414_040 Hb_054127_020 Hb_054127_020 Hb_004445_030--Hb_054127_020 Hb_047923_030 Hb_047923_030 Hb_004445_030--Hb_047923_030 Hb_002576_010 Hb_002576_010 Hb_004445_030--Hb_002576_010 Hb_004052_130 Hb_004052_130 Hb_004445_030--Hb_004052_130 Hb_009355_010 Hb_009355_010 Hb_004445_030--Hb_009355_010 Hb_004445_030--Hb_144838_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0137648 0 0.00745007 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.00738942 0.139708

CAGE analysis