Hb_147745_010

Information

Type -
Description -
Location Contig147745: 17748-17948
Sequence    

Annotation

kegg
ID rcu:RCOM_0267730
description hypothetical protein
nr
ID XP_012078505.1
description PREDICTED: uncharacterized protein LOC105639149 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KK55
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13185 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_12075: 17758-18078
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_147745_010 0.0 - - PREDICTED: uncharacterized protein LOC105639149 [Jatropha curcas]
2 Hb_000165_020 0.0800790768 - - PREDICTED: protein trichome birefringence-like 33 [Jatropha curcas]
3 Hb_000226_120 0.1514405995 - - PREDICTED: heparanase-like protein 3 isoform X1 [Jatropha curcas]
4 Hb_000236_230 0.1518336261 - - PREDICTED: E3 ubiquitin-protein ligase At4g11680 isoform X2 [Jatropha curcas]
5 Hb_150486_010 0.1614238379 - - hypothetical protein CICLE_v100116733mg, partial [Citrus clementina]
6 Hb_001366_110 0.1646537226 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000300_410 0.1813207264 - - hypothetical protein POPTR_0013s05860g [Populus trichocarpa]
8 Hb_001541_060 0.192422608 - - conserved hypothetical protein [Ricinus communis]
9 Hb_143748_010 0.1926905691 - - PREDICTED: uncharacterized protein LOC105648045 isoform X1 [Jatropha curcas]
10 Hb_000428_040 0.1934340498 - - PREDICTED: protein trichome birefringence-like 31 [Populus euphratica]
11 Hb_017358_080 0.1972061147 - - -
12 Hb_116701_010 0.2001624764 - - hypothetical protein POPTR_0005s19410g [Populus trichocarpa]
13 Hb_007311_050 0.2008520248 - - conserved hypothetical protein [Ricinus communis]
14 Hb_001214_040 0.2031992282 - - PREDICTED: protein trichome birefringence-like 3 [Jatropha curcas]
15 Hb_001989_100 0.2151646482 - - PREDICTED: uncharacterized protein LOC105636214 [Jatropha curcas]
16 Hb_000130_350 0.2158731598 - - PREDICTED: protein IQ-DOMAIN 1-like [Jatropha curcas]
17 Hb_004627_010 0.2159649436 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000054_010 0.2172183347 - - PREDICTED: uncharacterized protein At1g04910 isoform X1 [Jatropha curcas]
19 Hb_012090_030 0.2190079712 - - PREDICTED: autophagy-related protein 8C isoform X2 [Phoenix dactylifera]
20 Hb_008695_220 0.2204326811 - - PREDICTED: uncharacterized protein LOC105638863 [Jatropha curcas]

Gene co-expression network

sample Hb_147745_010 Hb_147745_010 Hb_000165_020 Hb_000165_020 Hb_147745_010--Hb_000165_020 Hb_000226_120 Hb_000226_120 Hb_147745_010--Hb_000226_120 Hb_000236_230 Hb_000236_230 Hb_147745_010--Hb_000236_230 Hb_150486_010 Hb_150486_010 Hb_147745_010--Hb_150486_010 Hb_001366_110 Hb_001366_110 Hb_147745_010--Hb_001366_110 Hb_000300_410 Hb_000300_410 Hb_147745_010--Hb_000300_410 Hb_000165_020--Hb_150486_010 Hb_000165_020--Hb_000236_230 Hb_001214_040 Hb_001214_040 Hb_000165_020--Hb_001214_040 Hb_000165_020--Hb_001366_110 Hb_116701_010 Hb_116701_010 Hb_000165_020--Hb_116701_010 Hb_000226_120--Hb_000236_230 Hb_017358_080 Hb_017358_080 Hb_000226_120--Hb_017358_080 Hb_000226_120--Hb_001366_110 Hb_000428_040 Hb_000428_040 Hb_000226_120--Hb_000428_040 Hb_000226_120--Hb_000165_020 Hb_000236_230--Hb_000428_040 Hb_000236_230--Hb_001366_110 Hb_000251_120 Hb_000251_120 Hb_000236_230--Hb_000251_120 Hb_000236_230--Hb_116701_010 Hb_000130_350 Hb_000130_350 Hb_000236_230--Hb_000130_350 Hb_005183_130 Hb_005183_130 Hb_000236_230--Hb_005183_130 Hb_001541_060 Hb_001541_060 Hb_150486_010--Hb_001541_060 Hb_000108_180 Hb_000108_180 Hb_150486_010--Hb_000108_180 Hb_025645_020 Hb_025645_020 Hb_150486_010--Hb_025645_020 Hb_150486_010--Hb_000236_230 Hb_150486_010--Hb_001366_110 Hb_158092_050 Hb_158092_050 Hb_001366_110--Hb_158092_050 Hb_001366_110--Hb_116701_010 Hb_001366_110--Hb_000130_350 Hb_001366_110--Hb_000108_180 Hb_001366_110--Hb_001541_060 Hb_001989_100 Hb_001989_100 Hb_000300_410--Hb_001989_100 Hb_002157_270 Hb_002157_270 Hb_000300_410--Hb_002157_270 Hb_012707_010 Hb_012707_010 Hb_000300_410--Hb_012707_010 Hb_015675_030 Hb_015675_030 Hb_000300_410--Hb_015675_030 Hb_000950_030 Hb_000950_030 Hb_000300_410--Hb_000950_030 Hb_011310_040 Hb_011310_040 Hb_000300_410--Hb_011310_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.20384 15.6179 31.1577 667.811 18.4992 25.6826
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
21.4621 30.1134 101.869 8.04104 305.157

CAGE analysis