Hb_148025_010

Information

Type -
Description -
Location Contig148025: 118-717
Sequence    

Annotation

kegg
ID rcu:RCOM_1044030
description hypothetical protein
nr
ID XP_012065766.1
description PREDICTED: disease resistance protein RPS6-like isoform X2 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LFQ8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25445 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_148025_010 0.0 - - PREDICTED: disease resistance protein RPS6-like isoform X2 [Jatropha curcas]
2 Hb_000120_730 0.0942109575 - - hypothetical protein POPTR_0005s033002g, partial [Populus trichocarpa]
3 Hb_033594_120 0.1028395543 transcription factor TF Family: MYB-related PREDICTED: telomere repeat-binding factor 2 [Jatropha curcas]
4 Hb_002835_080 0.1043752214 - - PREDICTED: 50S ribosomal protein L19-1, chloroplastic-like [Jatropha curcas]
5 Hb_002477_330 0.1063047476 - - PREDICTED: glycylpeptide N-tetradecanoyltransferase 1-like [Jatropha curcas]
6 Hb_000009_080 0.1082621625 transcription factor TF Family: GRAS PREDICTED: scarecrow-like protein 15 [Jatropha curcas]
7 Hb_000671_050 0.1118391033 - - PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Jatropha curcas]
8 Hb_022693_060 0.113003558 - - -
9 Hb_000959_260 0.1130495349 - - PREDICTED: ribonuclease P protein subunit p25-like protein [Jatropha curcas]
10 Hb_009051_030 0.1133496211 - - PREDICTED: thioredoxin O1, mitochondrial-like [Jatropha curcas]
11 Hb_007881_030 0.1153466651 - - Protein YME1, putative [Ricinus communis]
12 Hb_002182_080 0.1157210882 - - 3-5 exonuclease, putative [Ricinus communis]
13 Hb_011360_070 0.1159262926 - - PREDICTED: zinc finger RNA-binding protein [Jatropha curcas]
14 Hb_002890_140 0.116199442 - - PREDICTED: uncharacterized protein LOC100263805 [Vitis vinifera]
15 Hb_000479_090 0.1169554399 - - PREDICTED: zinc finger RNA-binding protein [Jatropha curcas]
16 Hb_005289_030 0.1174572561 - - PREDICTED: receptor homology region, transmembrane domain- and RING domain-containing protein 2 [Jatropha curcas]
17 Hb_020956_020 0.1175235684 - - PREDICTED: SNF1-related protein kinase regulatory subunit beta-3-like [Jatropha curcas]
18 Hb_008092_040 0.1182042471 - - PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like [Jatropha curcas]
19 Hb_110291_010 0.1217953776 - - conserved hypothetical protein [Ricinus communis]
20 Hb_010504_020 0.1223030349 - - PREDICTED: calmodulin-7 isoform X1 [Vitis vinifera]

Gene co-expression network

sample Hb_148025_010 Hb_148025_010 Hb_000120_730 Hb_000120_730 Hb_148025_010--Hb_000120_730 Hb_033594_120 Hb_033594_120 Hb_148025_010--Hb_033594_120 Hb_002835_080 Hb_002835_080 Hb_148025_010--Hb_002835_080 Hb_002477_330 Hb_002477_330 Hb_148025_010--Hb_002477_330 Hb_000009_080 Hb_000009_080 Hb_148025_010--Hb_000009_080 Hb_000671_050 Hb_000671_050 Hb_148025_010--Hb_000671_050 Hb_000210_180 Hb_000210_180 Hb_000120_730--Hb_000210_180 Hb_110291_010 Hb_110291_010 Hb_000120_730--Hb_110291_010 Hb_000373_280 Hb_000373_280 Hb_000120_730--Hb_000373_280 Hb_018838_030 Hb_018838_030 Hb_000120_730--Hb_018838_030 Hb_003878_070 Hb_003878_070 Hb_000120_730--Hb_003878_070 Hb_003633_030 Hb_003633_030 Hb_033594_120--Hb_003633_030 Hb_001252_130 Hb_001252_130 Hb_033594_120--Hb_001252_130 Hb_000421_220 Hb_000421_220 Hb_033594_120--Hb_000421_220 Hb_000054_090 Hb_000054_090 Hb_033594_120--Hb_000054_090 Hb_000960_060 Hb_000960_060 Hb_033594_120--Hb_000960_060 Hb_002473_130 Hb_002473_130 Hb_033594_120--Hb_002473_130 Hb_019280_040 Hb_019280_040 Hb_002835_080--Hb_019280_040 Hb_148644_010 Hb_148644_010 Hb_002835_080--Hb_148644_010 Hb_002182_080 Hb_002182_080 Hb_002835_080--Hb_002182_080 Hb_000010_330 Hb_000010_330 Hb_002835_080--Hb_000010_330 Hb_000959_260 Hb_000959_260 Hb_002835_080--Hb_000959_260 Hb_007691_030 Hb_007691_030 Hb_002835_080--Hb_007691_030 Hb_010504_020 Hb_010504_020 Hb_002477_330--Hb_010504_020 Hb_002477_330--Hb_148644_010 Hb_000103_090 Hb_000103_090 Hb_002477_330--Hb_000103_090 Hb_004128_190 Hb_004128_190 Hb_002477_330--Hb_004128_190 Hb_000045_090 Hb_000045_090 Hb_002477_330--Hb_000045_090 Hb_143398_010 Hb_143398_010 Hb_002477_330--Hb_143398_010 Hb_002046_190 Hb_002046_190 Hb_000009_080--Hb_002046_190 Hb_000512_060 Hb_000512_060 Hb_000009_080--Hb_000512_060 Hb_005686_060 Hb_005686_060 Hb_000009_080--Hb_005686_060 Hb_109092_010 Hb_109092_010 Hb_000009_080--Hb_109092_010 Hb_000009_080--Hb_002835_080 Hb_000035_320 Hb_000035_320 Hb_000671_050--Hb_000035_320 Hb_000976_410 Hb_000976_410 Hb_000671_050--Hb_000976_410 Hb_001100_060 Hb_001100_060 Hb_000671_050--Hb_001100_060 Hb_000876_070 Hb_000876_070 Hb_000671_050--Hb_000876_070 Hb_004724_080 Hb_004724_080 Hb_000671_050--Hb_004724_080 Hb_002105_040 Hb_002105_040 Hb_000671_050--Hb_002105_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.24554 1.48094 0.714937 2.38022 1.33741 3.70822
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.80801 4.87593 2.33079 1.55346 2.14112

CAGE analysis