Hb_148113_010

Information

Type -
Description -
Location Contig148113: 99-1779
Sequence    

Annotation

kegg
ID cit:102626418
description alpha/beta hydrolase domain-containing protein 17C-like
nr
ID XP_006482221.1
description PREDICTED: alpha/beta hydrolase domain-containing protein 17C-like isoform X3 [Citrus sinensis]
swissprot
ID Q6DEY3
description Alpha/beta hydrolase domain-containing protein 17B OS=Xenopus tropicalis GN=abhd17b PE=2 SV=1
trembl
ID A0A067KMF6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13025 PE=4 SV=1
Gene Ontology
ID GO:0005576
description alpha beta hydrolase domain-containing protein 17c-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_148113_010 0.0 - - PREDICTED: alpha/beta hydrolase domain-containing protein 17C-like isoform X3 [Citrus sinensis]
2 Hb_005488_200 0.065099627 - - PREDICTED: uncharacterized protein LOC105632499 isoform X1 [Jatropha curcas]
3 Hb_000023_090 0.0828464783 - - mak, putative [Ricinus communis]
4 Hb_000072_180 0.0830629738 - - PREDICTED: EVI5-like protein [Jatropha curcas]
5 Hb_000046_350 0.0831499589 - - conserved hypothetical protein [Ricinus communis]
6 Hb_028515_010 0.0874009846 - - PREDICTED: protein DEFECTIVE IN MERISTEM SILENCING 3 isoform X1 [Jatropha curcas]
7 Hb_000120_020 0.0883094821 - - PREDICTED: inositol 3-kinase [Jatropha curcas]
8 Hb_002027_040 0.0911659306 - - synapse-associated protein, putative [Ricinus communis]
9 Hb_004837_160 0.0930930397 - - PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform X1 [Jatropha curcas]
10 Hb_000373_130 0.0940114721 - - PREDICTED: protein FAM188A [Jatropha curcas]
11 Hb_000820_090 0.0948302582 - - -
12 Hb_000161_060 0.0961764595 - - PREDICTED: probable magnesium transporter NIPA4 [Jatropha curcas]
13 Hb_000748_130 0.0967350785 - - PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X1 [Jatropha curcas]
14 Hb_003376_250 0.0983383398 - - Transducin/WD40 repeat-like superfamily protein [Theobroma cacao]
15 Hb_006420_100 0.0983393775 - - PREDICTED: protein bicaudal C homolog 1 [Jatropha curcas]
16 Hb_000291_080 0.0987137798 - - Vacuolar protein sorting-associated protein VPS9, putative [Ricinus communis]
17 Hb_003697_040 0.0987145821 - - hypothetical protein B456_005G209600 [Gossypium raimondii]
18 Hb_001959_190 0.0990018196 transcription factor TF Family: SET PREDICTED: histone-lysine N-methyltransferase family member SUVH9-like [Jatropha curcas]
19 Hb_000016_160 0.0992306435 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 48 [Jatropha curcas]
20 Hb_000985_060 0.0995703402 - - PREDICTED: protein transport protein SFT2-like isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_148113_010 Hb_148113_010 Hb_005488_200 Hb_005488_200 Hb_148113_010--Hb_005488_200 Hb_000023_090 Hb_000023_090 Hb_148113_010--Hb_000023_090 Hb_000072_180 Hb_000072_180 Hb_148113_010--Hb_000072_180 Hb_000046_350 Hb_000046_350 Hb_148113_010--Hb_000046_350 Hb_028515_010 Hb_028515_010 Hb_148113_010--Hb_028515_010 Hb_000120_020 Hb_000120_020 Hb_148113_010--Hb_000120_020 Hb_000982_080 Hb_000982_080 Hb_005488_200--Hb_000982_080 Hb_007416_060 Hb_007416_060 Hb_005488_200--Hb_007416_060 Hb_003376_250 Hb_003376_250 Hb_005488_200--Hb_003376_250 Hb_000603_080 Hb_000603_080 Hb_005488_200--Hb_000603_080 Hb_003697_040 Hb_003697_040 Hb_005488_200--Hb_003697_040 Hb_002005_020 Hb_002005_020 Hb_000023_090--Hb_002005_020 Hb_004218_110 Hb_004218_110 Hb_000023_090--Hb_004218_110 Hb_000477_060 Hb_000477_060 Hb_000023_090--Hb_000477_060 Hb_000363_360 Hb_000363_360 Hb_000023_090--Hb_000363_360 Hb_000023_090--Hb_003697_040 Hb_006420_100 Hb_006420_100 Hb_000072_180--Hb_006420_100 Hb_000072_180--Hb_000046_350 Hb_004672_010 Hb_004672_010 Hb_000072_180--Hb_004672_010 Hb_000072_180--Hb_028515_010 Hb_027625_010 Hb_027625_010 Hb_000072_180--Hb_027625_010 Hb_000046_350--Hb_004672_010 Hb_001222_080 Hb_001222_080 Hb_000046_350--Hb_001222_080 Hb_001284_030 Hb_001284_030 Hb_000046_350--Hb_001284_030 Hb_000046_350--Hb_006420_100 Hb_005568_120 Hb_005568_120 Hb_028515_010--Hb_005568_120 Hb_004837_160 Hb_004837_160 Hb_028515_010--Hb_004837_160 Hb_000373_130 Hb_000373_130 Hb_028515_010--Hb_000373_130 Hb_003349_090 Hb_003349_090 Hb_028515_010--Hb_003349_090 Hb_114310_080 Hb_114310_080 Hb_028515_010--Hb_114310_080 Hb_000985_060 Hb_000985_060 Hb_028515_010--Hb_000985_060 Hb_011381_080 Hb_011381_080 Hb_000120_020--Hb_011381_080 Hb_002742_090 Hb_002742_090 Hb_000120_020--Hb_002742_090 Hb_000016_160 Hb_000016_160 Hb_000120_020--Hb_000016_160 Hb_000120_020--Hb_028515_010 Hb_000108_190 Hb_000108_190 Hb_000120_020--Hb_000108_190 Hb_000254_050 Hb_000254_050 Hb_000120_020--Hb_000254_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.12812 2.87614 1.52772 6.42403 2.49931 3.70522
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.68897 8.90206 11.1737 5.68894 4.44552

CAGE analysis