Hb_148891_010

Information

Type -
Description -
Location Contig148891: 2581-3408
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_148891_010 0.0 - - -
2 Hb_000445_190 0.1584401801 - - -
3 Hb_004102_030 0.2428773793 desease resistance Gene Name: NB-ARC PREDICTED: probable disease resistance protein At5g63020 [Jatropha curcas]
4 Hb_001017_080 0.2517928436 - - hypothetical protein POPTR_0010s06020g [Populus trichocarpa]
5 Hb_004931_010 0.2572313134 - - inosine triphosphate pyrophosphatase, putative [Ricinus communis]
6 Hb_000803_040 0.2606633346 - - -
7 Hb_001495_060 0.2630478815 - - PREDICTED: probable aldo-keto reductase 1 [Jatropha curcas]
8 Hb_003225_030 0.2642276758 - - Pectinesterase-4 precursor, putative [Ricinus communis]
9 Hb_010913_010 0.2651776371 desease resistance Gene Name: NB-ARC PREDICTED: TMV resistance protein N-like [Jatropha curcas]
10 Hb_011689_130 0.2660125673 - - PREDICTED: receptor-like cytosolic serine/threonine-protein kinase RBK2 isoform X1 [Jatropha curcas]
11 Hb_002685_180 0.267403255 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
12 Hb_069022_010 0.2716221699 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000179_150 0.2767498489 - - hypothetical protein ZEAMMB73_153699 [Zea mays]
14 Hb_032202_030 0.2780179719 - - -
15 Hb_001366_080 0.278183642 transcription factor TF Family: NAC NAC transcription factor 068 [Jatropha curcas]
16 Hb_000567_040 0.2795324163 - - PREDICTED: uncharacterized protein LOC105649657 [Jatropha curcas]
17 Hb_000099_230 0.2799971685 - - PREDICTED: F-box protein SKIP19-like [Gossypium raimondii]
18 Hb_003322_010 0.2812101596 - - PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
19 Hb_137068_010 0.2870291125 - - hypothetical protein CISIN_1g003571mg [Citrus sinensis]
20 Hb_000023_200 0.2870413876 - - hypothetical protein POPTR_0018s02910g [Populus trichocarpa]

Gene co-expression network

sample Hb_148891_010 Hb_148891_010 Hb_000445_190 Hb_000445_190 Hb_148891_010--Hb_000445_190 Hb_004102_030 Hb_004102_030 Hb_148891_010--Hb_004102_030 Hb_001017_080 Hb_001017_080 Hb_148891_010--Hb_001017_080 Hb_004931_010 Hb_004931_010 Hb_148891_010--Hb_004931_010 Hb_000803_040 Hb_000803_040 Hb_148891_010--Hb_000803_040 Hb_001495_060 Hb_001495_060 Hb_148891_010--Hb_001495_060 Hb_069022_010 Hb_069022_010 Hb_000445_190--Hb_069022_010 Hb_000099_230 Hb_000099_230 Hb_000445_190--Hb_000099_230 Hb_000445_190--Hb_001017_080 Hb_005714_050 Hb_005714_050 Hb_000445_190--Hb_005714_050 Hb_032974_010 Hb_032974_010 Hb_000445_190--Hb_032974_010 Hb_009976_010 Hb_009976_010 Hb_004102_030--Hb_009976_010 Hb_000612_040 Hb_000612_040 Hb_004102_030--Hb_000612_040 Hb_084889_010 Hb_084889_010 Hb_004102_030--Hb_084889_010 Hb_004102_030--Hb_032974_010 Hb_000275_130 Hb_000275_130 Hb_004102_030--Hb_000275_130 Hb_000025_440 Hb_000025_440 Hb_001017_080--Hb_000025_440 Hb_156503_040 Hb_156503_040 Hb_001017_080--Hb_156503_040 Hb_109578_010 Hb_109578_010 Hb_001017_080--Hb_109578_010 Hb_000500_210 Hb_000500_210 Hb_001017_080--Hb_000500_210 Hb_001017_080--Hb_004931_010 Hb_000975_270 Hb_000975_270 Hb_001017_080--Hb_000975_270 Hb_001186_080 Hb_001186_080 Hb_004931_010--Hb_001186_080 Hb_003322_010 Hb_003322_010 Hb_004931_010--Hb_003322_010 Hb_000191_030 Hb_000191_030 Hb_004931_010--Hb_000191_030 Hb_153216_010 Hb_153216_010 Hb_004931_010--Hb_153216_010 Hb_001504_050 Hb_001504_050 Hb_004931_010--Hb_001504_050 Hb_032202_030 Hb_032202_030 Hb_000803_040--Hb_032202_030 Hb_000749_080 Hb_000749_080 Hb_000803_040--Hb_000749_080 Hb_000529_240 Hb_000529_240 Hb_000803_040--Hb_000529_240 Hb_000803_040--Hb_003322_010 Hb_000803_040--Hb_000445_190 Hb_000453_210 Hb_000453_210 Hb_001495_060--Hb_000453_210 Hb_001495_060--Hb_000529_240 Hb_002685_180 Hb_002685_180 Hb_001495_060--Hb_002685_180 Hb_003209_030 Hb_003209_030 Hb_001495_060--Hb_003209_030 Hb_001143_010 Hb_001143_010 Hb_001495_060--Hb_001143_010 Hb_001047_140 Hb_001047_140 Hb_001495_060--Hb_001047_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.192147 0.186894 0.13094 0.0814607 0.125049 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.491471 0.386268 0 0.0632954 0

CAGE analysis