Hb_148971_010

Information

Type -
Description -
Location Contig148971: 6-715
Sequence    

Annotation

kegg
ID rcu:RCOM_0885080
description Disease resistance protein RPS5, putative
nr
ID XP_002522629.1
description Disease resistance protein RPS5, putative [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9S9G0
description Disease resistance protein RPS5, putative OS=Ricinus communis GN=RCOM_0885080 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_148971_010 0.0 - - Disease resistance protein RPS5, putative [Ricinus communis]
2 Hb_162047_010 0.1879039676 - - PREDICTED: protein indeterminate-domain 16 [Jatropha curcas]
3 Hb_003910_020 0.1994742931 - - PREDICTED: reticulon-like protein B13 [Jatropha curcas]
4 Hb_004195_030 0.2175160443 - - hypothetical protein POPTR_0006s17880g, partial [Populus trichocarpa]
5 Hb_000331_690 0.2196648668 - - PREDICTED: F-box/WD repeat-containing protein 11-like [Jatropha curcas]
6 Hb_002393_060 0.2270648742 transcription factor TF Family: MYB PREDICTED: transcription factor WER-like [Jatropha curcas]
7 Hb_004089_010 0.2296735229 - - hypothetical protein MIMGU_mgv1a018902mg [Erythranthe guttata]
8 Hb_008725_190 0.230062796 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein 5-like [Jatropha curcas]
9 Hb_000431_030 0.2305453129 transcription factor TF Family: C2H2 zinc finger family protein [Populus trichocarpa]
10 Hb_001131_100 0.2366957305 - - PREDICTED: uncharacterized protein LOC105638386 [Jatropha curcas]
11 Hb_004767_010 0.2370164577 - - hypothetical protein CICLE_v10010736mg [Citrus clementina]
12 Hb_001481_110 0.2405329301 - - S-adenosylmethionine synthetase 1 family protein [Populus trichocarpa]
13 Hb_009252_120 0.2406680277 - - conserved hypothetical protein [Ricinus communis]
14 Hb_010883_220 0.2420170891 - - PREDICTED: flavonol synthase/flavanone 3-hydroxylase-like [Prunus mume]
15 Hb_161954_010 0.2427178055 - - hypothetical protein JCGZ_05404 [Jatropha curcas]
16 Hb_004607_180 0.2447753826 - - conserved hypothetical protein [Ricinus communis]
17 Hb_006816_540 0.2458346907 - - PREDICTED: bidirectional sugar transporter SWEET16-like [Jatropha curcas]
18 Hb_008554_010 0.2469143701 - - -
19 Hb_000805_330 0.2473105174 - - PREDICTED: ricin-like [Elaeis guineensis]
20 Hb_055993_010 0.2473793912 - - PREDICTED: uncharacterized protein LOC104883809 [Beta vulgaris subsp. vulgaris]

Gene co-expression network

sample Hb_148971_010 Hb_148971_010 Hb_162047_010 Hb_162047_010 Hb_148971_010--Hb_162047_010 Hb_003910_020 Hb_003910_020 Hb_148971_010--Hb_003910_020 Hb_004195_030 Hb_004195_030 Hb_148971_010--Hb_004195_030 Hb_000331_690 Hb_000331_690 Hb_148971_010--Hb_000331_690 Hb_002393_060 Hb_002393_060 Hb_148971_010--Hb_002393_060 Hb_004089_010 Hb_004089_010 Hb_148971_010--Hb_004089_010 Hb_091826_010 Hb_091826_010 Hb_162047_010--Hb_091826_010 Hb_004767_010 Hb_004767_010 Hb_162047_010--Hb_004767_010 Hb_162047_010--Hb_002393_060 Hb_000983_180 Hb_000983_180 Hb_162047_010--Hb_000983_180 Hb_162047_010--Hb_004089_010 Hb_161954_010 Hb_161954_010 Hb_162047_010--Hb_161954_010 Hb_009252_120 Hb_009252_120 Hb_003910_020--Hb_009252_120 Hb_000003_430 Hb_000003_430 Hb_003910_020--Hb_000003_430 Hb_002820_120 Hb_002820_120 Hb_003910_020--Hb_002820_120 Hb_011416_020 Hb_011416_020 Hb_003910_020--Hb_011416_020 Hb_001791_010 Hb_001791_010 Hb_003910_020--Hb_001791_010 Hb_131957_010 Hb_131957_010 Hb_004195_030--Hb_131957_010 Hb_005396_110 Hb_005396_110 Hb_004195_030--Hb_005396_110 Hb_132517_010 Hb_132517_010 Hb_004195_030--Hb_132517_010 Hb_087468_010 Hb_087468_010 Hb_004195_030--Hb_087468_010 Hb_008554_010 Hb_008554_010 Hb_004195_030--Hb_008554_010 Hb_160459_030 Hb_160459_030 Hb_004195_030--Hb_160459_030 Hb_017417_020 Hb_017417_020 Hb_000331_690--Hb_017417_020 Hb_069232_010 Hb_069232_010 Hb_000331_690--Hb_069232_010 Hb_001131_100 Hb_001131_100 Hb_000331_690--Hb_001131_100 Hb_000270_010 Hb_000270_010 Hb_000331_690--Hb_000270_010 Hb_005380_030 Hb_005380_030 Hb_000331_690--Hb_005380_030 Hb_000331_690--Hb_008554_010 Hb_002393_060--Hb_004767_010 Hb_002393_060--Hb_161954_010 Hb_002393_060--Hb_004089_010 Hb_002393_060--Hb_091826_010 Hb_006816_540 Hb_006816_540 Hb_002393_060--Hb_006816_540 Hb_001998_130 Hb_001998_130 Hb_004089_010--Hb_001998_130 Hb_004089_010--Hb_004767_010 Hb_004089_010--Hb_091826_010 Hb_004089_010--Hb_001131_100 Hb_004089_010--Hb_161954_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0605973 1.64791 0 1.12867 0 0.170144
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0871225 0 0.215223 0

CAGE analysis