Hb_149507_010

Information

Type -
Description -
Location Contig149507: 897-1506
Sequence    

Annotation

kegg
ID mdm:103427767
description probable serine/threonine-protein kinase WNK9
nr
ID XP_008364058.1
description PREDICTED: probable serine/threonine-protein kinase WNK9 [Malus domestica]
swissprot
ID Q9CAV6
description Serine/threonine-protein kinase WNK1 OS=Arabidopsis thaliana GN=WNK1 PE=1 SV=1
trembl
ID B9RTS8
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0912240 PE=4 SV=1
Gene Ontology
ID GO:0004672
description probable serine threonine-protein kinase wnk9

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_149507_010 0.0 - - PREDICTED: probable serine/threonine-protein kinase WNK9 [Malus domestica]
2 Hb_002370_020 0.0660139131 - - hypothetical protein JCGZ_19971 [Jatropha curcas]
3 Hb_001269_660 0.0766324784 - - PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 2 [Jatropha curcas]
4 Hb_012395_060 0.0970523837 - - PREDICTED: actin-related protein 2/3 complex subunit 2B [Jatropha curcas]
5 Hb_001277_010 0.0980463474 - - unknown [Populus trichocarpa]
6 Hb_025623_010 0.105869282 - - -
7 Hb_000866_400 0.1088493231 - - -
8 Hb_003968_030 0.1107990793 - - UDP-glucosyltransferase, putative [Ricinus communis]
9 Hb_000635_100 0.1164761484 - - -
10 Hb_002374_510 0.1212340249 - - Esterase precursor, putative [Ricinus communis]
11 Hb_001143_210 0.122106837 - - PREDICTED: E3 ubiquitin ligase BIG BROTHER-related [Jatropha curcas]
12 Hb_004804_010 0.1224620235 - - PREDICTED: trans-resveratrol di-O-methyltransferase-like [Populus euphratica]
13 Hb_146036_010 0.1255318236 - - hypothetical protein B456_005G052500 [Gossypium raimondii]
14 Hb_000017_140 0.1281487396 - - polygalacturonase, putative [Ricinus communis]
15 Hb_010264_010 0.1283485088 - - PREDICTED: protein ZINC INDUCED FACILITATOR-LIKE 1-like [Jatropha curcas]
16 Hb_000186_150 0.1306109768 - - PREDICTED: light-induced protein, chloroplastic-like [Nicotiana sylvestris]
17 Hb_169077_030 0.1311878154 desease resistance Gene Name: NB-ARC PREDICTED: probable disease resistance protein RF9 [Jatropha curcas]
18 Hb_002518_230 0.1335624753 - - -
19 Hb_007370_010 0.1340352758 - - PREDICTED: indole-3-pyruvate monooxygenase YUCCA6 [Jatropha curcas]
20 Hb_011709_010 0.1340619651 - - PREDICTED: phytosulfokine receptor 1-like [Jatropha curcas]

Gene co-expression network

sample Hb_149507_010 Hb_149507_010 Hb_002370_020 Hb_002370_020 Hb_149507_010--Hb_002370_020 Hb_001269_660 Hb_001269_660 Hb_149507_010--Hb_001269_660 Hb_012395_060 Hb_012395_060 Hb_149507_010--Hb_012395_060 Hb_001277_010 Hb_001277_010 Hb_149507_010--Hb_001277_010 Hb_025623_010 Hb_025623_010 Hb_149507_010--Hb_025623_010 Hb_000866_400 Hb_000866_400 Hb_149507_010--Hb_000866_400 Hb_002370_020--Hb_000866_400 Hb_002370_020--Hb_025623_010 Hb_003371_280 Hb_003371_280 Hb_002370_020--Hb_003371_280 Hb_002370_020--Hb_001269_660 Hb_002374_510 Hb_002374_510 Hb_002370_020--Hb_002374_510 Hb_001269_660--Hb_012395_060 Hb_010264_010 Hb_010264_010 Hb_001269_660--Hb_010264_010 Hb_121624_010 Hb_121624_010 Hb_001269_660--Hb_121624_010 Hb_001269_660--Hb_001277_010 Hb_002518_230 Hb_002518_230 Hb_001269_660--Hb_002518_230 Hb_169077_030 Hb_169077_030 Hb_012395_060--Hb_169077_030 Hb_004804_010 Hb_004804_010 Hb_012395_060--Hb_004804_010 Hb_001534_140 Hb_001534_140 Hb_012395_060--Hb_001534_140 Hb_138585_010 Hb_138585_010 Hb_012395_060--Hb_138585_010 Hb_000152_570 Hb_000152_570 Hb_012395_060--Hb_000152_570 Hb_001104_220 Hb_001104_220 Hb_001277_010--Hb_001104_220 Hb_000635_100 Hb_000635_100 Hb_001277_010--Hb_000635_100 Hb_000941_110 Hb_000941_110 Hb_001277_010--Hb_000941_110 Hb_008441_010 Hb_008441_010 Hb_001277_010--Hb_008441_010 Hb_011501_020 Hb_011501_020 Hb_025623_010--Hb_011501_020 Hb_025623_010--Hb_000866_400 Hb_025623_010--Hb_121624_010 Hb_025623_010--Hb_001269_660 Hb_000866_400--Hb_011501_020 Hb_000620_050 Hb_000620_050 Hb_000866_400--Hb_000620_050 Hb_031579_010 Hb_031579_010 Hb_000866_400--Hb_031579_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.121284 2.85057 11.0467 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 2.86532 7.96665

CAGE analysis