Hb_149694_010

Information

Type -
Description -
Location Contig149694: 1804-4071
Sequence    

Annotation

kegg
ID rcu:RCOM_1212390
description Xylem serine proteinase 1 precursor, putative (EC:1.3.1.74)
nr
ID XP_002524587.1
description Xylem serine proteinase 1 precursor, putative [Ricinus communis]
swissprot
ID F4JXC5
description Subtilisin-like protease SBT5.4 OS=Arabidopsis thaliana GN=SBT5.4 PE=1 SV=1
trembl
ID B9SF18
description Xylem serine proteinase 1, putative OS=Ricinus communis GN=RCOM_1212390 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_149694_010 0.0 - - Xylem serine proteinase 1 precursor, putative [Ricinus communis]
2 Hb_002740_050 0.0695639937 transcription factor TF Family: MYB PREDICTED: transcription factor MYB86-like [Populus euphratica]
3 Hb_003855_060 0.07547077 - - PREDICTED: uncharacterized protein At4g06744-like [Jatropha curcas]
4 Hb_143629_170 0.0813283387 - - PREDICTED: pectin acetylesterase 12 [Jatropha curcas]
5 Hb_007904_150 0.0841472039 - - PREDICTED: probable pectate lyase 5 [Populus euphratica]
6 Hb_004943_020 0.086887964 - - cationic amino acid transporter, putative [Ricinus communis]
7 Hb_052530_020 0.0874092632 - - cytochrome B5 isoform 1, putative [Ricinus communis]
8 Hb_005656_120 0.0905477427 - - PREDICTED: uncharacterized protein LOC105637451 [Jatropha curcas]
9 Hb_003417_050 0.0927879046 - - ankyrin repeat-containing protein, putative [Ricinus communis]
10 Hb_006242_050 0.0955687583 - - Osmotin precursor, putative [Ricinus communis]
11 Hb_128986_010 0.0975598903 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000915_170 0.0982645478 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 7 isoform X1 [Vitis vinifera]
13 Hb_166718_010 0.0987137295 - - heat-shock protein, putative [Ricinus communis]
14 Hb_001981_050 0.0992474329 - - PREDICTED: aldehyde dehydrogenase family 3 member F1-like [Jatropha curcas]
15 Hb_000318_310 0.1014264105 - - hypothetical protein POPTR_0009s11190g [Populus trichocarpa]
16 Hb_004032_280 0.1017834016 - - PREDICTED: uncharacterized protein LOC105635149 [Jatropha curcas]
17 Hb_002150_090 0.1019547209 - - PREDICTED: probable inactive receptor kinase At4g23740 [Jatropha curcas]
18 Hb_001278_120 0.1025463991 - - PREDICTED: reticulon-like protein B14 [Jatropha curcas]
19 Hb_002119_100 0.1040978973 - - cytochrome B561, putative [Ricinus communis]
20 Hb_027472_060 0.104369909 transcription factor TF Family: GRAS DELLA protein GAI1, putative [Ricinus communis]

Gene co-expression network

sample Hb_149694_010 Hb_149694_010 Hb_002740_050 Hb_002740_050 Hb_149694_010--Hb_002740_050 Hb_003855_060 Hb_003855_060 Hb_149694_010--Hb_003855_060 Hb_143629_170 Hb_143629_170 Hb_149694_010--Hb_143629_170 Hb_007904_150 Hb_007904_150 Hb_149694_010--Hb_007904_150 Hb_004943_020 Hb_004943_020 Hb_149694_010--Hb_004943_020 Hb_052530_020 Hb_052530_020 Hb_149694_010--Hb_052530_020 Hb_002740_050--Hb_003855_060 Hb_002740_050--Hb_007904_150 Hb_002740_050--Hb_143629_170 Hb_002119_100 Hb_002119_100 Hb_002740_050--Hb_002119_100 Hb_000329_780 Hb_000329_780 Hb_002740_050--Hb_000329_780 Hb_003855_060--Hb_007904_150 Hb_001981_050 Hb_001981_050 Hb_003855_060--Hb_001981_050 Hb_003855_060--Hb_004943_020 Hb_000318_310 Hb_000318_310 Hb_003855_060--Hb_000318_310 Hb_185811_010 Hb_185811_010 Hb_003855_060--Hb_185811_010 Hb_128986_010 Hb_128986_010 Hb_143629_170--Hb_128986_010 Hb_143629_170--Hb_004943_020 Hb_006242_050 Hb_006242_050 Hb_143629_170--Hb_006242_050 Hb_003417_050 Hb_003417_050 Hb_143629_170--Hb_003417_050 Hb_143629_170--Hb_003855_060 Hb_007904_150--Hb_001981_050 Hb_007904_150--Hb_000318_310 Hb_000915_170 Hb_000915_170 Hb_007904_150--Hb_000915_170 Hb_007904_150--Hb_185811_010 Hb_001278_120 Hb_001278_120 Hb_004943_020--Hb_001278_120 Hb_000343_070 Hb_000343_070 Hb_004943_020--Hb_000343_070 Hb_004943_020--Hb_007904_150 Hb_004459_010 Hb_004459_010 Hb_004943_020--Hb_004459_010 Hb_000928_030 Hb_000928_030 Hb_052530_020--Hb_000928_030 Hb_004137_040 Hb_004137_040 Hb_052530_020--Hb_004137_040 Hb_000599_150 Hb_000599_150 Hb_052530_020--Hb_000599_150 Hb_002150_090 Hb_002150_090 Hb_052530_020--Hb_002150_090 Hb_000028_190 Hb_000028_190 Hb_052530_020--Hb_000028_190 Hb_000103_200 Hb_000103_200 Hb_052530_020--Hb_000103_200
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0294773 0.954749 1.67259 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0318816 0 0.0638561 1.45164

CAGE analysis