Hb_149731_010

Information

Type -
Description -
Location Contig149731: 209-1316
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_149731_010 0.0 - - -
2 Hb_000088_030 0.2518444705 - - hypothetical protein JCGZ_10947 [Jatropha curcas]
3 Hb_000236_270 0.2535637944 - - ATP-binding cassette transporter, putative [Ricinus communis]
4 Hb_010603_030 0.2583489259 - - -
5 Hb_000181_040 0.2690444762 transcription factor TF Family: NAC PREDICTED: protein CUP-SHAPED COTYLEDON 2 [Jatropha curcas]
6 Hb_000038_150 0.315909468 - - PREDICTED: E3 ubiquitin-protein ligase RNF181 homolog [Jatropha curcas]
7 Hb_074152_010 0.3170815028 - - -
8 Hb_008406_130 0.3188524793 - - -
9 Hb_045502_010 0.3219556122 - - prefoldin subunit 1 [Jatropha curcas]
10 Hb_000318_260 0.3240673971 - - PREDICTED: cell division cycle-associated 7-like protein [Jatropha curcas]
11 Hb_005116_020 0.3243225046 - - PREDICTED: DNA repair helicase UVH6 isoform X2 [Sesamum indicum]
12 Hb_000808_060 0.3266089505 transcription factor TF Family: C2C2-GATA PREDICTED: GATA transcription factor 16-like [Jatropha curcas]
13 Hb_003666_010 0.3282444109 - - hypothetical protein JCGZ_12303 [Jatropha curcas]
14 Hb_001773_020 0.3300499051 - - hypothetical protein POPTR_0016s00980g [Populus trichocarpa]
15 Hb_000917_250 0.3304824464 - - PREDICTED: coiled-coil domain-containing protein 130-like [Populus euphratica]
16 Hb_000109_150 0.330647098 - - conserved hypothetical protein [Ricinus communis]
17 Hb_002903_120 0.3324526831 - - -
18 Hb_024505_030 0.3341271059 - - PREDICTED: aspartate aminotransferase, chloroplastic [Jatropha curcas]
19 Hb_000463_050 0.3437753321 - - histone-lysine n-methyltransferase, suvh, putative [Ricinus communis]
20 Hb_001221_010 0.3438071495 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_149731_010 Hb_149731_010 Hb_000088_030 Hb_000088_030 Hb_149731_010--Hb_000088_030 Hb_000236_270 Hb_000236_270 Hb_149731_010--Hb_000236_270 Hb_010603_030 Hb_010603_030 Hb_149731_010--Hb_010603_030 Hb_000181_040 Hb_000181_040 Hb_149731_010--Hb_000181_040 Hb_000038_150 Hb_000038_150 Hb_149731_010--Hb_000038_150 Hb_074152_010 Hb_074152_010 Hb_149731_010--Hb_074152_010 Hb_140595_010 Hb_140595_010 Hb_000088_030--Hb_140595_010 Hb_000318_260 Hb_000318_260 Hb_000088_030--Hb_000318_260 Hb_002903_120 Hb_002903_120 Hb_000088_030--Hb_002903_120 Hb_002483_020 Hb_002483_020 Hb_000088_030--Hb_002483_020 Hb_045502_010 Hb_045502_010 Hb_000088_030--Hb_045502_010 Hb_000580_130 Hb_000580_130 Hb_000088_030--Hb_000580_130 Hb_005116_020 Hb_005116_020 Hb_000236_270--Hb_005116_020 Hb_000236_270--Hb_074152_010 Hb_013983_010 Hb_013983_010 Hb_000236_270--Hb_013983_010 Hb_000236_270--Hb_010603_030 Hb_029866_010 Hb_029866_010 Hb_000236_270--Hb_029866_010 Hb_000236_270--Hb_000038_150 Hb_134732_010 Hb_134732_010 Hb_010603_030--Hb_134732_010 Hb_010603_030--Hb_005116_020 Hb_001951_120 Hb_001951_120 Hb_010603_030--Hb_001951_120 Hb_031073_010 Hb_031073_010 Hb_010603_030--Hb_031073_010 Hb_002983_100 Hb_002983_100 Hb_010603_030--Hb_002983_100 Hb_010603_030--Hb_000088_030 Hb_007189_020 Hb_007189_020 Hb_000181_040--Hb_007189_020 Hb_000181_040--Hb_000236_270 Hb_058884_010 Hb_058884_010 Hb_000181_040--Hb_058884_010 Hb_000917_250 Hb_000917_250 Hb_000181_040--Hb_000917_250 Hb_155932_010 Hb_155932_010 Hb_000181_040--Hb_155932_010 Hb_000038_150--Hb_045502_010 Hb_001159_210 Hb_001159_210 Hb_000038_150--Hb_001159_210 Hb_000038_150--Hb_134732_010 Hb_035360_010 Hb_035360_010 Hb_000038_150--Hb_035360_010 Hb_000619_070 Hb_000619_070 Hb_000038_150--Hb_000619_070 Hb_004460_020 Hb_004460_020 Hb_000038_150--Hb_004460_020 Hb_074152_010--Hb_000917_250 Hb_001773_020 Hb_001773_020 Hb_074152_010--Hb_001773_020 Hb_006045_060 Hb_006045_060 Hb_074152_010--Hb_006045_060 Hb_000721_020 Hb_000721_020 Hb_074152_010--Hb_000721_020 Hb_000326_020 Hb_000326_020 Hb_074152_010--Hb_000326_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.136054 0 0.105949 0 0.486962 0.219763
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.16569 0 0.0680694 0

CAGE analysis