Hb_150751_010

Information

Type -
Description -
Location Contig150751: 192-443
Sequence    

Annotation

kegg
ID sly:104646181
description uncharacterized LOC104646181
nr
ID XP_012075840.1
description PREDICTED: uncharacterized protein LOC105637052 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A061EU35
description Uncharacterized protein OS=Theobroma cacao GN=TCM_023328 PE=4 SV=1
Gene Ontology
ID GO:0005488
description PREDICTED: uncharacterized protein LOC105637052

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_150751_010 0.0 - - PREDICTED: uncharacterized protein LOC105637052 [Jatropha curcas]
2 Hb_105712_010 0.2354830819 - - PREDICTED: uncharacterized protein LOC105650298, partial [Jatropha curcas]
3 Hb_012253_010 0.2669940047 - - hypothetical protein PRUPE_ppa022673mg [Prunus persica]
4 Hb_002943_030 0.2679334986 - - -
5 Hb_159679_010 0.3035112836 - - PREDICTED: uncharacterized protein LOC105786838 [Gossypium raimondii]
6 Hb_008768_030 0.3046658042 - - -
7 Hb_001150_030 0.3186058278 - - NADP-dependent oxidoreductase P1 isoform 3 [Theobroma cacao]
8 Hb_005438_010 0.3223256729 - - PREDICTED: uncharacterized protein LOC104902779 [Beta vulgaris subsp. vulgaris]
9 Hb_001005_070 0.3317550609 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF113-like [Jatropha curcas]
10 Hb_005128_040 0.3579196548 - - conserved hypothetical protein [Ricinus communis]
11 Hb_150651_050 0.3609572965 - - phosphoglycerate mutase, putative [Ricinus communis]
12 Hb_003096_030 0.3633670318 - - PREDICTED: bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic [Jatropha curcas]
13 Hb_002243_080 0.3636165493 desease resistance Gene Name: TIR PREDICTED: TMV resistance protein N-like [Vitis vinifera]
14 Hb_002073_140 0.364117205 - - -
15 Hb_028977_020 0.3661252354 - - hypothetical protein JCGZ_21319 [Jatropha curcas]
16 Hb_007336_030 0.3671874259 - - -
17 Hb_032299_060 0.371824311 - - PREDICTED: protein UPSTREAM OF FLC-like [Elaeis guineensis]
18 Hb_002805_290 0.3754793899 transcription factor TF Family: GRAS transcription factor, putative [Ricinus communis]
19 Hb_001512_020 0.375623236 - - PREDICTED: GDSL esterase/lipase At5g14450 [Jatropha curcas]
20 Hb_012180_020 0.378108035 - - hypothetical protein POPTR_0001s15100g [Populus trichocarpa]

Gene co-expression network

sample Hb_150751_010 Hb_150751_010 Hb_105712_010 Hb_105712_010 Hb_150751_010--Hb_105712_010 Hb_012253_010 Hb_012253_010 Hb_150751_010--Hb_012253_010 Hb_002943_030 Hb_002943_030 Hb_150751_010--Hb_002943_030 Hb_159679_010 Hb_159679_010 Hb_150751_010--Hb_159679_010 Hb_008768_030 Hb_008768_030 Hb_150751_010--Hb_008768_030 Hb_001150_030 Hb_001150_030 Hb_150751_010--Hb_001150_030 Hb_105712_010--Hb_002943_030 Hb_003335_070 Hb_003335_070 Hb_105712_010--Hb_003335_070 Hb_005128_040 Hb_005128_040 Hb_105712_010--Hb_005128_040 Hb_004705_030 Hb_004705_030 Hb_105712_010--Hb_004705_030 Hb_005214_130 Hb_005214_130 Hb_105712_010--Hb_005214_130 Hb_005438_010 Hb_005438_010 Hb_012253_010--Hb_005438_010 Hb_011640_030 Hb_011640_030 Hb_012253_010--Hb_011640_030 Hb_012253_010--Hb_159679_010 Hb_001623_210 Hb_001623_210 Hb_012253_010--Hb_001623_210 Hb_012253_010--Hb_008768_030 Hb_000098_220 Hb_000098_220 Hb_002943_030--Hb_000098_220 Hb_002943_030--Hb_001150_030 Hb_012660_020 Hb_012660_020 Hb_002943_030--Hb_012660_020 Hb_081504_010 Hb_081504_010 Hb_002943_030--Hb_081504_010 Hb_159679_010--Hb_005438_010 Hb_020096_020 Hb_020096_020 Hb_159679_010--Hb_020096_020 Hb_007336_030 Hb_007336_030 Hb_159679_010--Hb_007336_030 Hb_015322_040 Hb_015322_040 Hb_159679_010--Hb_015322_040 Hb_001534_010 Hb_001534_010 Hb_159679_010--Hb_001534_010 Hb_000098_320 Hb_000098_320 Hb_159679_010--Hb_000098_320 Hb_007904_140 Hb_007904_140 Hb_008768_030--Hb_007904_140 Hb_008768_030--Hb_015322_040 Hb_008768_030--Hb_001534_010 Hb_008768_030--Hb_000098_320 Hb_001243_010 Hb_001243_010 Hb_008768_030--Hb_001243_010 Hb_000008_180 Hb_000008_180 Hb_008768_030--Hb_000008_180 Hb_001150_030--Hb_012660_020 Hb_003878_030 Hb_003878_030 Hb_001150_030--Hb_003878_030 Hb_003647_030 Hb_003647_030 Hb_001150_030--Hb_003647_030 Hb_002609_060 Hb_002609_060 Hb_001150_030--Hb_002609_060 Hb_001150_030--Hb_000098_220
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.27061 0 0 0 0 0.274837
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.610639 0 0.619532 0.454353 0

CAGE analysis