Hb_151281_010

Information

Type -
Description -
Location Contig151281: 39-587
Sequence    

Annotation

kegg
ID rcu:RCOM_0503990
description ATP binding protein, putative (EC:2.7.10.2)
nr
ID XP_012087806.1
description PREDICTED: LOW QUALITY PROTEIN: probable L-type lectin-domain containing receptor kinase S.5 [Jatropha curcas]
swissprot
ID Q9FG33
description Probable L-type lectin-domain containing receptor kinase S.5 OS=Arabidopsis thaliana GN=LECRKS5 PE=2 SV=1
trembl
ID B9SXJ7
description ATP binding protein, putative OS=Ricinus communis GN=RCOM_0503990 PE=3 SV=1
Gene Ontology
ID GO:0004674
description probable l-type lectin-domain containing receptor kinase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_151281_010 0.0 - - PREDICTED: LOW QUALITY PROTEIN: probable L-type lectin-domain containing receptor kinase S.5 [Jatropha curcas]
2 Hb_079955_010 0.0439881569 transcription factor TF Family: MYB-related PREDICTED: myb-related protein Myb4-like [Populus euphratica]
3 Hb_131591_010 0.0806982445 - - PREDICTED: cytochrome P450 83B1-like [Jatropha curcas]
4 Hb_002621_030 0.0929043256 - - hypothetical protein CISIN_1g006155mg [Citrus sinensis]
5 Hb_003090_060 0.0959161727 - - PAR1 protein [Theobroma cacao]
6 Hb_000676_030 0.115505806 - - PREDICTED: probable mitochondrial chaperone BCS1-B [Jatropha curcas]
7 Hb_011791_010 0.1229306491 - - PREDICTED: cytochrome P450 83B1-like [Jatropha curcas]
8 Hb_001691_190 0.1287981591 - - conserved hypothetical protein [Ricinus communis]
9 Hb_003636_010 0.1319801551 - - hypothetical protein CISIN_1g037850mg, partial [Citrus sinensis]
10 Hb_106969_010 0.1344579567 - - Cytochrome P450 76C4 [Glycine soja]
11 Hb_111985_060 0.1356092189 - - PREDICTED: cytokinin dehydrogenase 5 [Jatropha curcas]
12 Hb_004931_050 0.1383655216 transcription factor TF Family: MYB-related Transcription repressor MYB4, putative [Ricinus communis]
13 Hb_000333_130 0.1429995108 - - Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis]
14 Hb_001481_030 0.1437397965 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
15 Hb_002219_090 0.1450459628 - - protein kinase atmrk1, putative [Ricinus communis]
16 Hb_000170_230 0.149266155 - - PREDICTED: probable receptor-like protein kinase At1g11050 isoform X1 [Jatropha curcas]
17 Hb_000532_060 0.1507623603 - - copper-transporting atpase p-type, putative [Ricinus communis]
18 Hb_005054_300 0.1510101293 - - aquaporin [Hevea brasiliensis]
19 Hb_000345_190 0.1556256371 transcription factor TF Family: C2H2 hypothetical protein POPTR_0005s02730g [Populus trichocarpa]
20 Hb_001424_080 0.1568873766 - - PREDICTED: probable L-type lectin-domain containing receptor kinase S.5 [Jatropha curcas]

Gene co-expression network

sample Hb_151281_010 Hb_151281_010 Hb_079955_010 Hb_079955_010 Hb_151281_010--Hb_079955_010 Hb_131591_010 Hb_131591_010 Hb_151281_010--Hb_131591_010 Hb_002621_030 Hb_002621_030 Hb_151281_010--Hb_002621_030 Hb_003090_060 Hb_003090_060 Hb_151281_010--Hb_003090_060 Hb_000676_030 Hb_000676_030 Hb_151281_010--Hb_000676_030 Hb_011791_010 Hb_011791_010 Hb_151281_010--Hb_011791_010 Hb_079955_010--Hb_003090_060 Hb_079955_010--Hb_002621_030 Hb_079955_010--Hb_131591_010 Hb_079955_010--Hb_011791_010 Hb_111985_060 Hb_111985_060 Hb_079955_010--Hb_111985_060 Hb_131591_010--Hb_002621_030 Hb_001691_190 Hb_001691_190 Hb_131591_010--Hb_001691_190 Hb_131591_010--Hb_000676_030 Hb_131591_010--Hb_003090_060 Hb_002621_030--Hb_003090_060 Hb_002621_030--Hb_000676_030 Hb_002621_030--Hb_111985_060 Hb_003090_060--Hb_111985_060 Hb_005054_300 Hb_005054_300 Hb_003090_060--Hb_005054_300 Hb_004931_050 Hb_004931_050 Hb_003090_060--Hb_004931_050 Hb_000676_030--Hb_011791_010 Hb_001073_060 Hb_001073_060 Hb_000676_030--Hb_001073_060 Hb_002219_090 Hb_002219_090 Hb_000676_030--Hb_002219_090 Hb_000676_030--Hb_079955_010 Hb_005000_200 Hb_005000_200 Hb_000676_030--Hb_005000_200 Hb_011791_010--Hb_002219_090 Hb_011791_010--Hb_001073_060 Hb_000333_130 Hb_000333_130 Hb_011791_010--Hb_000333_130 Hb_106969_010 Hb_106969_010 Hb_011791_010--Hb_106969_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.720226 0.0783608 0.103196 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.299726 0

CAGE analysis