Hb_151401_010

Information

Type -
Description -
Location Contig151401: 4709-7122
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_151401_010 0.0 - - -
2 Hb_000432_020 0.1172629523 desease resistance Gene Name: Tropomyosin_1 PREDICTED: putative disease resistance protein RGA1 isoform X2 [Jatropha curcas]
3 Hb_007533_050 0.14642102 - - -
4 Hb_144838_010 0.1523567211 - - hypothetical protein JCGZ_08246 [Jatropha curcas]
5 Hb_003414_040 0.1538087758 - - hypothetical protein VITISV_016691 [Vitis vinifera]
6 Hb_003311_020 0.1614543188 - - conserved hypothetical protein [Ricinus communis]
7 Hb_093388_010 0.1642476154 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1 [Jatropha curcas]
8 Hb_147604_010 0.1670480233 - - PREDICTED: uncharacterized protein LOC105634770 [Jatropha curcas]
9 Hb_001250_030 0.1673445641 - - conserved hypothetical protein [Ricinus communis]
10 Hb_001490_020 0.1684055944 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
11 Hb_000405_010 0.1696509326 - - hypothetical protein JCGZ_15779 [Jatropha curcas]
12 Hb_002598_030 0.1718045373 - - -
13 Hb_000011_470 0.1730386678 - - PREDICTED: uncharacterized protein LOC103485923 [Cucumis melo]
14 Hb_019654_170 0.1737060929 transcription factor TF Family: ARID PREDICTED: high mobility group B protein 9 [Jatropha curcas]
15 Hb_049285_010 0.1738128712 - - PREDICTED: terpene synthase 10-like [Jatropha curcas]
16 Hb_000522_030 0.1779664989 - - hypothetical protein VITISV_006017 [Vitis vinifera]
17 Hb_005678_030 0.179274161 - - PREDICTED: uncharacterized protein At4g06744-like [Jatropha curcas]
18 Hb_032016_010 0.1814054253 - - PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At3g28040-like isoform X1 [Citrus sinensis]
19 Hb_101462_010 0.1828645018 - - PREDICTED: probable receptor-like protein kinase At5g39030 isoform X2 [Jatropha curcas]
20 Hb_006111_040 0.1832606722 - - PREDICTED: uncharacterized protein LOC103485923 [Cucumis melo]

Gene co-expression network

sample Hb_151401_010 Hb_151401_010 Hb_000432_020 Hb_000432_020 Hb_151401_010--Hb_000432_020 Hb_007533_050 Hb_007533_050 Hb_151401_010--Hb_007533_050 Hb_144838_010 Hb_144838_010 Hb_151401_010--Hb_144838_010 Hb_003414_040 Hb_003414_040 Hb_151401_010--Hb_003414_040 Hb_003311_020 Hb_003311_020 Hb_151401_010--Hb_003311_020 Hb_093388_010 Hb_093388_010 Hb_151401_010--Hb_093388_010 Hb_000432_020--Hb_007533_050 Hb_000432_020--Hb_003414_040 Hb_000432_020--Hb_003311_020 Hb_000432_020--Hb_093388_010 Hb_001250_030 Hb_001250_030 Hb_000432_020--Hb_001250_030 Hb_032016_010 Hb_032016_010 Hb_007533_050--Hb_032016_010 Hb_007533_050--Hb_003311_020 Hb_000567_270 Hb_000567_270 Hb_007533_050--Hb_000567_270 Hb_049285_010 Hb_049285_010 Hb_007533_050--Hb_049285_010 Hb_006455_020 Hb_006455_020 Hb_007533_050--Hb_006455_020 Hb_007575_010 Hb_007575_010 Hb_144838_010--Hb_007575_010 Hb_017640_010 Hb_017640_010 Hb_144838_010--Hb_017640_010 Hb_002598_030 Hb_002598_030 Hb_144838_010--Hb_002598_030 Hb_000672_130 Hb_000672_130 Hb_144838_010--Hb_000672_130 Hb_147604_010 Hb_147604_010 Hb_144838_010--Hb_147604_010 Hb_144838_010--Hb_001250_030 Hb_001383_080 Hb_001383_080 Hb_003414_040--Hb_001383_080 Hb_003414_040--Hb_093388_010 Hb_003414_040--Hb_001250_030 Hb_003414_040--Hb_003311_020 Hb_001793_040 Hb_001793_040 Hb_003414_040--Hb_001793_040 Hb_003994_070 Hb_003994_070 Hb_003311_020--Hb_003994_070 Hb_003311_020--Hb_000567_270 Hb_003311_020--Hb_032016_010 Hb_009851_090 Hb_009851_090 Hb_003311_020--Hb_009851_090 Hb_093388_010--Hb_001250_030 Hb_029510_060 Hb_029510_060 Hb_093388_010--Hb_029510_060 Hb_023738_010 Hb_023738_010 Hb_093388_010--Hb_023738_010 Hb_005678_030 Hb_005678_030 Hb_093388_010--Hb_005678_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.098361 0.0345671 0.0531359 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0499913 0 0 0.12646 1.52947

CAGE analysis