Hb_151497_010

Information

Type -
Description -
Location Contig151497: 37-967
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_151497_010 0.0 - - -
2 Hb_030827_050 0.2319971221 - - hypothetical protein CISIN_1g040641mg, partial [Citrus sinensis]
3 Hb_007101_220 0.2988410369 - - Gibberellin-regulated protein 3 precursor, putative [Ricinus communis]
4 Hb_010863_040 0.3057683963 - - PREDICTED: monothiol glutaredoxin-S6-like [Jatropha curcas]
5 Hb_000069_080 0.309792536 - - PREDICTED: laccase-6 [Jatropha curcas]
6 Hb_002835_130 0.3102080672 - - PREDICTED: uncharacterized protein LOC104647507 [Solanum lycopersicum]
7 Hb_001545_230 0.3134271882 - - Nonspecific lipid-transfer protein A, putative [Ricinus communis]
8 Hb_022250_120 0.3174487195 - - PREDICTED: uncharacterized protein LOC105648689 [Jatropha curcas]
9 Hb_010174_140 0.3195082628 - - Alpha-L-fucosidase 2 precursor, putative [Ricinus communis]
10 Hb_143643_010 0.3212587892 transcription factor TF Family: C2H2 PREDICTED: uncharacterized protein LOC103967596 [Pyrus x bretschneideri]
11 Hb_000982_040 0.3227107306 - - conserved hypothetical protein [Ricinus communis]
12 Hb_001369_310 0.3274834198 - - tonoplast intrinsic protein, putative [Ricinus communis]
13 Hb_000438_040 0.3392039173 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RGA2-like [Jatropha curcas]
14 Hb_000097_040 0.3428883465 transcription factor TF Family: MYB myb domain protein [Hevea brasiliensis]
15 Hb_001907_130 0.3485728714 - - PREDICTED: CTL-like protein DDB_G0274487 isoform X1 [Jatropha curcas]
16 Hb_004453_200 0.3587057857 - - Boron transporter, putative [Ricinus communis]
17 Hb_000740_030 0.3600290241 - - hypothetical protein VITISV_038271 [Vitis vinifera]
18 Hb_002710_020 0.3648112491 - - -
19 Hb_004800_110 0.3674125631 - - PREDICTED: proline-rich receptor-like protein kinase PERK4 [Jatropha curcas]
20 Hb_059379_020 0.3674694918 - - PREDICTED: caffeic acid 3-O-methyltransferase 1-like [Populus euphratica]

Gene co-expression network

sample Hb_151497_010 Hb_151497_010 Hb_030827_050 Hb_030827_050 Hb_151497_010--Hb_030827_050 Hb_007101_220 Hb_007101_220 Hb_151497_010--Hb_007101_220 Hb_010863_040 Hb_010863_040 Hb_151497_010--Hb_010863_040 Hb_000069_080 Hb_000069_080 Hb_151497_010--Hb_000069_080 Hb_002835_130 Hb_002835_130 Hb_151497_010--Hb_002835_130 Hb_001545_230 Hb_001545_230 Hb_151497_010--Hb_001545_230 Hb_030827_050--Hb_007101_220 Hb_006810_070 Hb_006810_070 Hb_030827_050--Hb_006810_070 Hb_000908_010 Hb_000908_010 Hb_030827_050--Hb_000908_010 Hb_030827_050--Hb_001545_230 Hb_118346_010 Hb_118346_010 Hb_030827_050--Hb_118346_010 Hb_007101_220--Hb_006810_070 Hb_000905_150 Hb_000905_150 Hb_007101_220--Hb_000905_150 Hb_003117_050 Hb_003117_050 Hb_007101_220--Hb_003117_050 Hb_003238_030 Hb_003238_030 Hb_007101_220--Hb_003238_030 Hb_010863_040--Hb_002835_130 Hb_010863_040--Hb_000069_080 Hb_002710_020 Hb_002710_020 Hb_010863_040--Hb_002710_020 Hb_007694_030 Hb_007694_030 Hb_010863_040--Hb_007694_030 Hb_004800_110 Hb_004800_110 Hb_010863_040--Hb_004800_110 Hb_000224_110 Hb_000224_110 Hb_010863_040--Hb_000224_110 Hb_000069_080--Hb_002835_130 Hb_000069_080--Hb_002710_020 Hb_000069_080--Hb_007694_030 Hb_000069_080--Hb_004800_110 Hb_000069_080--Hb_000224_110 Hb_002835_130--Hb_007694_030 Hb_002835_130--Hb_002710_020 Hb_002835_130--Hb_004800_110 Hb_002835_130--Hb_000224_110 Hb_001617_030 Hb_001617_030 Hb_001545_230--Hb_001617_030 Hb_001545_230--Hb_000908_010 Hb_001514_080 Hb_001514_080 Hb_001545_230--Hb_001514_080 Hb_005085_010 Hb_005085_010 Hb_001545_230--Hb_005085_010 Hb_000010_120 Hb_000010_120 Hb_001545_230--Hb_000010_120 Hb_002325_020 Hb_002325_020 Hb_001545_230--Hb_002325_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.155283 0.11355 0 0.272167 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.476298 0

CAGE analysis