Hb_152414_010

Information

Type desease resistance
Description Gene Name: NB-ARC
Location Contig152414: 103-699
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa024232mg
description hypothetical protein
nr
ID XP_007200039.1
description hypothetical protein PRUPE_ppa024232mg [Prunus persica]
swissprot
ID Q39214
description Disease resistance protein RPM1 OS=Arabidopsis thaliana GN=RPM1 PE=1 SV=1
trembl
ID M5VWC1
description Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024232mg PE=4 SV=1
Gene Ontology
ID GO:0043531
description disease resistance protein rpm1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_152414_010 0.0 desease resistance Gene Name: NB-ARC hypothetical protein PRUPE_ppa024232mg [Prunus persica]
2 Hb_004879_030 0.0810786487 - - PREDICTED: uncharacterized protein LOC105124685 [Populus euphratica]
3 Hb_006358_030 0.1018229204 - - hypothetical protein JCGZ_23771 [Jatropha curcas]
4 Hb_115114_010 0.1041055487 - - conserved hypothetical protein [Ricinus communis]
5 Hb_036492_020 0.1085998905 - - PREDICTED: disease resistance protein RPM1 [Jatropha curcas]
6 Hb_026415_010 0.113664683 - - PREDICTED: probable receptor-like protein kinase At1g67000 isoform X1 [Jatropha curcas]
7 Hb_003929_040 0.1196961328 - - PREDICTED: glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2-like isoform X2 [Jatropha curcas]
8 Hb_134022_010 0.1274074742 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RPM1 [Jatropha curcas]
9 Hb_132259_010 0.1276764823 - - PREDICTED: WAT1-related protein At5g64700 [Jatropha curcas]
10 Hb_001821_050 0.1281785662 - - hypothetical protein CICLE_v10032084mg [Citrus clementina]
11 Hb_090306_010 0.1306252745 - - hypothetical protein POPTR_0007s02300g [Populus trichocarpa]
12 Hb_000032_590 0.1307167897 - - PREDICTED: glutaredoxin domain-containing cysteine-rich protein 1 [Jatropha curcas]
13 Hb_000325_070 0.1316333108 - - ABC transporter family protein [Hevea brasiliensis]
14 Hb_009557_080 0.1352240469 - - PREDICTED: glutaredoxin-C9-like [Populus euphratica]
15 Hb_004724_300 0.1352461975 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 90-like [Jatropha curcas]
16 Hb_019026_040 0.135428286 - - S-locus lectin protein kinase family protein [Theobroma cacao]
17 Hb_004109_150 0.14022458 - - glutathione-S-transferase tau 1 [Hevea brasiliensis]
18 Hb_000156_080 0.1430998739 - - Potassium channel KAT2, putative [Ricinus communis]
19 Hb_002030_100 0.1431001946 - - PREDICTED: putative clathrin assembly protein At4g40080 [Jatropha curcas]
20 Hb_000656_260 0.1469150308 - - PREDICTED: uncharacterized protein LOC105631376 [Jatropha curcas]

Gene co-expression network

sample Hb_152414_010 Hb_152414_010 Hb_004879_030 Hb_004879_030 Hb_152414_010--Hb_004879_030 Hb_006358_030 Hb_006358_030 Hb_152414_010--Hb_006358_030 Hb_115114_010 Hb_115114_010 Hb_152414_010--Hb_115114_010 Hb_036492_020 Hb_036492_020 Hb_152414_010--Hb_036492_020 Hb_026415_010 Hb_026415_010 Hb_152414_010--Hb_026415_010 Hb_003929_040 Hb_003929_040 Hb_152414_010--Hb_003929_040 Hb_004879_030--Hb_026415_010 Hb_004879_030--Hb_115114_010 Hb_000325_070 Hb_000325_070 Hb_004879_030--Hb_000325_070 Hb_009557_080 Hb_009557_080 Hb_004879_030--Hb_009557_080 Hb_004879_030--Hb_006358_030 Hb_006358_030--Hb_036492_020 Hb_000032_590 Hb_000032_590 Hb_006358_030--Hb_000032_590 Hb_002030_100 Hb_002030_100 Hb_006358_030--Hb_002030_100 Hb_005772_020 Hb_005772_020 Hb_006358_030--Hb_005772_020 Hb_132259_010 Hb_132259_010 Hb_115114_010--Hb_132259_010 Hb_001046_040 Hb_001046_040 Hb_115114_010--Hb_001046_040 Hb_044624_010 Hb_044624_010 Hb_115114_010--Hb_044624_010 Hb_000140_220 Hb_000140_220 Hb_115114_010--Hb_000140_220 Hb_000813_090 Hb_000813_090 Hb_115114_010--Hb_000813_090 Hb_000402_180 Hb_000402_180 Hb_036492_020--Hb_000402_180 Hb_000656_260 Hb_000656_260 Hb_036492_020--Hb_000656_260 Hb_134022_010 Hb_134022_010 Hb_036492_020--Hb_134022_010 Hb_036492_020--Hb_003929_040 Hb_026415_010--Hb_000325_070 Hb_009403_010 Hb_009403_010 Hb_026415_010--Hb_009403_010 Hb_026415_010--Hb_000813_090 Hb_026415_010--Hb_115114_010 Hb_003929_040--Hb_000402_180 Hb_003929_040--Hb_006358_030 Hb_003811_030 Hb_003811_030 Hb_003929_040--Hb_003811_030 Hb_070613_010 Hb_070613_010 Hb_003929_040--Hb_070613_010 Hb_003929_040--Hb_134022_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 7.45988 2.65593 2.41796 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.101732 0 0 0.0983935 3.55582

CAGE analysis