Hb_152528_010

Information

Type -
Description -
Location Contig152528: 239-754
Sequence    

Annotation

kegg
ID rcu:RCOM_0901450
description receptor-kinase, putative (EC:1.3.1.74 2.7.10.2)
nr
ID KDP37049.1
description hypothetical protein JCGZ_06105 [Jatropha curcas]
swissprot
ID Q8LPB4
description Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1
trembl
ID A0A067KYW7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06105 PE=4 SV=1
Gene Ontology
ID GO:0016021
description receptor like protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_152528_010 0.0 - - hypothetical protein JCGZ_06105 [Jatropha curcas]
2 Hb_000756_030 0.0370862144 - - PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
3 Hb_108744_010 0.0393950068 - - cinnamoyl-CoA reductase, putative [Ricinus communis]
4 Hb_000654_060 0.048278452 - - hypothetical protein CICLE_v10027550mg [Citrus clementina]
5 Hb_001398_110 0.087303284 - - Early nodulin 55-2 precursor, putative [Ricinus communis]
6 Hb_022845_010 0.0935558809 - - PREDICTED: protein NRT1/ PTR FAMILY 5.10-like [Jatropha curcas]
7 Hb_004241_140 0.0966664945 - - S-locus lectin protein kinase family protein, putative [Theobroma cacao]
8 Hb_000045_290 0.0998151736 - - -
9 Hb_000331_020 0.1004639798 - - cytochrome P450, putative [Ricinus communis]
10 Hb_006142_020 0.1010521578 - - JHL25P11.12 [Jatropha curcas]
11 Hb_005649_070 0.1039991606 - - conserved hypothetical protein [Ricinus communis]
12 Hb_001190_030 0.1096188245 - - hypothetical protein VITISV_017115 [Vitis vinifera]
13 Hb_002362_010 0.1126570526 - - hypothetical protein JCGZ_12328 [Jatropha curcas]
14 Hb_001322_220 0.1203236978 - - Major pollen allergen Ory s 1 precursor, putative [Ricinus communis]
15 Hb_144649_010 0.1210561574 - - 60S ribosomal protein L34A [Hevea brasiliensis]
16 Hb_000160_110 0.1219572282 - - PREDICTED: uncharacterized protein LOC100253584 [Vitis vinifera]
17 Hb_000256_170 0.12492213 - - PREDICTED: uncharacterized protein LOC105638320 [Jatropha curcas]
18 Hb_169136_010 0.1268739876 - - conserved hypothetical protein [Ricinus communis]
19 Hb_034498_010 0.1312808263 - - PREDICTED: uncharacterized protein LOC105636842 [Jatropha curcas]
20 Hb_022465_010 0.1316097328 - - hypothetical protein JCGZ_06012 [Jatropha curcas]

Gene co-expression network

sample Hb_152528_010 Hb_152528_010 Hb_000756_030 Hb_000756_030 Hb_152528_010--Hb_000756_030 Hb_108744_010 Hb_108744_010 Hb_152528_010--Hb_108744_010 Hb_000654_060 Hb_000654_060 Hb_152528_010--Hb_000654_060 Hb_001398_110 Hb_001398_110 Hb_152528_010--Hb_001398_110 Hb_022845_010 Hb_022845_010 Hb_152528_010--Hb_022845_010 Hb_004241_140 Hb_004241_140 Hb_152528_010--Hb_004241_140 Hb_000756_030--Hb_108744_010 Hb_000756_030--Hb_000654_060 Hb_006142_020 Hb_006142_020 Hb_000756_030--Hb_006142_020 Hb_000756_030--Hb_004241_140 Hb_000756_030--Hb_001398_110 Hb_108744_010--Hb_006142_020 Hb_108744_010--Hb_000654_060 Hb_169136_010 Hb_169136_010 Hb_108744_010--Hb_169136_010 Hb_005649_070 Hb_005649_070 Hb_108744_010--Hb_005649_070 Hb_000654_060--Hb_022845_010 Hb_000654_060--Hb_001398_110 Hb_022465_010 Hb_022465_010 Hb_000654_060--Hb_022465_010 Hb_000045_290 Hb_000045_290 Hb_001398_110--Hb_000045_290 Hb_001117_020 Hb_001117_020 Hb_001398_110--Hb_001117_020 Hb_001398_110--Hb_004241_140 Hb_019429_020 Hb_019429_020 Hb_001398_110--Hb_019429_020 Hb_000331_020 Hb_000331_020 Hb_001398_110--Hb_000331_020 Hb_001398_110--Hb_005649_070 Hb_001322_220 Hb_001322_220 Hb_022845_010--Hb_001322_220 Hb_001190_030 Hb_001190_030 Hb_022845_010--Hb_001190_030 Hb_120289_010 Hb_120289_010 Hb_022845_010--Hb_120289_010 Hb_000162_160 Hb_000162_160 Hb_022845_010--Hb_000162_160 Hb_004241_140--Hb_000045_290 Hb_004241_140--Hb_005649_070 Hb_004241_140--Hb_001117_020 Hb_055877_010 Hb_055877_010 Hb_004241_140--Hb_055877_010 Hb_004241_140--Hb_019429_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.112816 1.28755 0.530648 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis