Hb_152718_010

Information

Type -
Description -
Location Contig152718: 2-889
Sequence    

Annotation

kegg
ID pmum:103330553
description G-type lectin S-receptor-like serine/threonine-protein kinase RLK1
nr
ID XP_012092618.1
description PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 [Jatropha curcas]
swissprot
ID Q39202
description G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 OS=Arabidopsis thaliana GN=RLK1 PE=2 SV=2
trembl
ID A0A067J9H0
description Serine/threonine-protein kinase OS=Jatropha curcas GN=JCGZ_05280 PE=3 SV=1
Gene Ontology
ID GO:0004674
description g-type lectin s-receptor-like serine threonine-protein kinase rlk1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_152718_010 0.0 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 [Jatropha curcas]
2 Hb_118777_010 0.0989165919 - - leucine-rich repeat-containing protein, putative [Ricinus communis]
3 Hb_005333_100 0.1055423867 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000489_020 0.1059052468 - - PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 isoform X1 [Populus euphratica]
5 Hb_000976_060 0.1071541169 transcription factor TF Family: NAC NAC domain-containing protein, putative [Ricinus communis]
6 Hb_000265_020 0.1218903215 - - hypothetical protein POPTR_0011s16980g, partial [Populus trichocarpa]
7 Hb_001769_030 0.1223970322 - - PREDICTED: exocyst complex component EXO70A1-like [Jatropha curcas]
8 Hb_001838_010 0.1241915982 - - hypothetical protein POPTR_0005s18380g [Populus trichocarpa]
9 Hb_000512_080 0.1272758343 - - ankyrin repeat-containing protein, putative [Ricinus communis]
10 Hb_000521_290 0.1275728839 - - hypothetical protein POPTR_0001s23530g [Populus trichocarpa]
11 Hb_001454_160 0.1287570288 - - PREDICTED: translocase of chloroplast 159, chloroplastic [Jatropha curcas]
12 Hb_000343_260 0.1302131024 - - PREDICTED: probable receptor-like protein kinase At5g59700 [Jatropha curcas]
13 Hb_003117_060 0.132315744 - - PREDICTED: cytochrome P450 83B1-like [Jatropha curcas]
14 Hb_003636_010 0.1368957989 - - hypothetical protein CISIN_1g037850mg, partial [Citrus sinensis]
15 Hb_005542_110 0.1380660541 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_01203 [Jatropha curcas]
16 Hb_001514_100 0.1384317615 - - PREDICTED: F-box protein GID2 [Jatropha curcas]
17 Hb_011791_010 0.1419030979 - - PREDICTED: cytochrome P450 83B1-like [Jatropha curcas]
18 Hb_001363_030 0.144628857 - - PREDICTED: UDP-glycosyltransferase 74F2-like [Populus euphratica]
19 Hb_002085_070 0.1449596079 transcription factor TF Family: C2H2 nucleic acid binding protein, putative [Ricinus communis]
20 Hb_002219_090 0.1450848119 - - protein kinase atmrk1, putative [Ricinus communis]

Gene co-expression network

sample Hb_152718_010 Hb_152718_010 Hb_118777_010 Hb_118777_010 Hb_152718_010--Hb_118777_010 Hb_005333_100 Hb_005333_100 Hb_152718_010--Hb_005333_100 Hb_000489_020 Hb_000489_020 Hb_152718_010--Hb_000489_020 Hb_000976_060 Hb_000976_060 Hb_152718_010--Hb_000976_060 Hb_000265_020 Hb_000265_020 Hb_152718_010--Hb_000265_020 Hb_001769_030 Hb_001769_030 Hb_152718_010--Hb_001769_030 Hb_003636_010 Hb_003636_010 Hb_118777_010--Hb_003636_010 Hb_003117_060 Hb_003117_060 Hb_118777_010--Hb_003117_060 Hb_001363_030 Hb_001363_030 Hb_118777_010--Hb_001363_030 Hb_106969_010 Hb_106969_010 Hb_118777_010--Hb_106969_010 Hb_000070_140 Hb_000070_140 Hb_118777_010--Hb_000070_140 Hb_000120_980 Hb_000120_980 Hb_005333_100--Hb_000120_980 Hb_000684_010 Hb_000684_010 Hb_005333_100--Hb_000684_010 Hb_005333_100--Hb_000976_060 Hb_001838_010 Hb_001838_010 Hb_005333_100--Hb_001838_010 Hb_000255_020 Hb_000255_020 Hb_005333_100--Hb_000255_020 Hb_005333_100--Hb_000489_020 Hb_000489_020--Hb_000265_020 Hb_001355_110 Hb_001355_110 Hb_000489_020--Hb_001355_110 Hb_001623_470 Hb_001623_470 Hb_000489_020--Hb_001623_470 Hb_000489_020--Hb_001769_030 Hb_001454_160 Hb_001454_160 Hb_000976_060--Hb_001454_160 Hb_005542_110 Hb_005542_110 Hb_000976_060--Hb_005542_110 Hb_000976_060--Hb_001838_010 Hb_000976_060--Hb_001623_470 Hb_033045_010 Hb_033045_010 Hb_000265_020--Hb_033045_010 Hb_002085_070 Hb_002085_070 Hb_000265_020--Hb_002085_070 Hb_006970_150 Hb_006970_150 Hb_000265_020--Hb_006970_150 Hb_000521_290 Hb_000521_290 Hb_000265_020--Hb_000521_290 Hb_012018_020 Hb_012018_020 Hb_000265_020--Hb_012018_020 Hb_001769_030--Hb_001623_470 Hb_001769_030--Hb_005333_100 Hb_001769_030--Hb_001355_110 Hb_000203_060 Hb_000203_060 Hb_001769_030--Hb_000203_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0964675 37.9688 4.39401 2.6747 0.0240554 0.0226414
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 22.0274 4.50554

CAGE analysis