Hb_152910_020

Information

Type -
Description -
Location Contig152910: 9697-11429
Sequence    

Annotation

kegg
ID rcu:RCOM_0911940
description lactoylglutathione lyase, putative
nr
ID XP_012069642.1
description PREDICTED: lactoylglutathione lyase-like [Jatropha curcas]
swissprot
ID -
description -
trembl
ID B9RTQ8
description Lactoylglutathione lyase, putative OS=Ricinus communis GN=RCOM_0911940 PE=4 SV=1
Gene Ontology
ID GO:0016829
description lactoylglutathione lyase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_13142: 9721-11325
cDNA
(Sanger)
(ID:Location)		 027_D01.ab1: 9721-11306 , 032_G18.ab1: 9721-11315

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_152910_020 0.0 - - PREDICTED: lactoylglutathione lyase-like [Jatropha curcas]
2 Hb_003185_050 0.0741367264 - - PREDICTED: probable histone H2A variant 3 [Jatropha curcas]
3 Hb_001005_080 0.0790883261 - - PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Jatropha curcas]
4 Hb_029904_040 0.0794400149 - - putative aspartate aminotransferase protein, partial [Elaeis guineensis]
5 Hb_007192_100 0.0811183285 - - PREDICTED: protein DEHYDRATION-INDUCED 19 homolog 6-like [Jatropha curcas]
6 Hb_000115_230 0.0909990715 - - PREDICTED: cysteine--tRNA ligase, cytoplasmic-like [Jatropha curcas]
7 Hb_050806_010 0.091196408 - - PREDICTED: ubiquitin-conjugating enzyme E2-17 kDa [Jatropha curcas]
8 Hb_000905_180 0.0943673691 - - 60S ribosomal protein L31A [Hevea brasiliensis]
9 Hb_015807_100 0.094670642 transcription factor TF Family: bHLH DNA binding protein, putative [Ricinus communis]
10 Hb_007304_070 0.0950876293 - - hypoxanthine-guanine phosphoribosyltransferase, putative [Ricinus communis]
11 Hb_001633_030 0.0965698891 - - -
12 Hb_000389_080 0.0969311016 - - PREDICTED: uncharacterized protein At4g26485-like [Jatropha curcas]
13 Hb_120823_010 0.0974821377 - - -
14 Hb_002374_390 0.0990684102 - - vacuolar ATP synthase proteolipid subunit 1, 2, 3, putative [Ricinus communis]
15 Hb_010402_050 0.1002572676 - - -
16 Hb_000181_300 0.1003410536 - - PREDICTED: uncharacterized protein LOC105650445 isoform X2 [Jatropha curcas]
17 Hb_000349_290 0.1018305302 - - PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 1 [Jatropha curcas]
18 Hb_001481_140 0.104778026 - - PREDICTED: putative dual specificity protein phosphatase DSP8 [Jatropha curcas]
19 Hb_001172_100 0.1059204927 - - PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like isoform X1 [Jatropha curcas]
20 Hb_005463_140 0.1068970422 - - PREDICTED: histone deacetylase complex subunit SAP18 [Jatropha curcas]

Gene co-expression network

sample Hb_152910_020 Hb_152910_020 Hb_003185_050 Hb_003185_050 Hb_152910_020--Hb_003185_050 Hb_001005_080 Hb_001005_080 Hb_152910_020--Hb_001005_080 Hb_029904_040 Hb_029904_040 Hb_152910_020--Hb_029904_040 Hb_007192_100 Hb_007192_100 Hb_152910_020--Hb_007192_100 Hb_000115_230 Hb_000115_230 Hb_152910_020--Hb_000115_230 Hb_050806_010 Hb_050806_010 Hb_152910_020--Hb_050806_010 Hb_000349_290 Hb_000349_290 Hb_003185_050--Hb_000349_290 Hb_002374_390 Hb_002374_390 Hb_003185_050--Hb_002374_390 Hb_000905_180 Hb_000905_180 Hb_003185_050--Hb_000905_180 Hb_003326_020 Hb_003326_020 Hb_003185_050--Hb_003326_020 Hb_001016_090 Hb_001016_090 Hb_003185_050--Hb_001016_090 Hb_000417_260 Hb_000417_260 Hb_001005_080--Hb_000417_260 Hb_001481_140 Hb_001481_140 Hb_001005_080--Hb_001481_140 Hb_001519_030 Hb_001519_030 Hb_001005_080--Hb_001519_030 Hb_001005_080--Hb_007192_100 Hb_005463_140 Hb_005463_140 Hb_001005_080--Hb_005463_140 Hb_029904_040--Hb_050806_010 Hb_029904_040--Hb_001005_080 Hb_000389_080 Hb_000389_080 Hb_029904_040--Hb_000389_080 Hb_004449_200 Hb_004449_200 Hb_029904_040--Hb_004449_200 Hb_000364_030 Hb_000364_030 Hb_029904_040--Hb_000364_030 Hb_001172_120 Hb_001172_120 Hb_007192_100--Hb_001172_120 Hb_015807_100 Hb_015807_100 Hb_007192_100--Hb_015807_100 Hb_007192_100--Hb_000115_230 Hb_000384_120 Hb_000384_120 Hb_007192_100--Hb_000384_120 Hb_000239_030 Hb_000239_030 Hb_000115_230--Hb_000239_030 Hb_000115_230--Hb_015807_100 Hb_000115_230--Hb_001172_120 Hb_000115_230--Hb_002374_390 Hb_000392_380 Hb_000392_380 Hb_000115_230--Hb_000392_380 Hb_000027_150 Hb_000027_150 Hb_050806_010--Hb_000027_150 Hb_005663_120 Hb_005663_120 Hb_050806_010--Hb_005663_120 Hb_050806_010--Hb_007192_100 Hb_005527_040 Hb_005527_040 Hb_050806_010--Hb_005527_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
22.7775 23.4694 11.3007 38.7658 11.5727 25.5964
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
90.8158 131.638 84.7685 30.4734 24.4749

CAGE analysis