Hb_153180_010

Information

Type -
Description -
Location Contig153180: 73-704
Sequence    

Annotation

kegg
ID cit:102612134
description putative disease resistance protein At3g14460-like
nr
ID AKE49464.1
description NBS-LRR disease resistance protein NBS49 [Dimocarpus longan]
swissprot
ID Q9LRR5
description Putative disease resistance protein At3g14460 OS=Arabidopsis thaliana GN=At3g14460 PE=3 SV=1
trembl
ID A0A061FY80
description LRR and NB-ARC domains-containing disease resistance protein, putative OS=Theobroma cacao GN=TCM_045050 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_153180_010 0.0 - - NBS-LRR disease resistance protein NBS49 [Dimocarpus longan]
2 Hb_030827_080 0.0682980767 - - PREDICTED: uncharacterized protein LOC105648491 [Jatropha curcas]
3 Hb_002739_160 0.0692942555 transcription factor TF Family: G2-like transcription factor, putative [Ricinus communis]
4 Hb_001856_130 0.0884941487 - - hypothetical protein CISIN_1g022795mg [Citrus sinensis]
5 Hb_001198_180 0.0953244189 - - RecName: Full=Anthocyanidin 3-O-glucosyltransferase 1; AltName: Full=Flavonol 3-O-glucosyltransferase 1; AltName: Full=UDP-glucose flavonoid 3-O-glucosyltransferase 1 [Manihot esculenta]
6 Hb_002522_040 0.0973256823 - - hypothetical protein JCGZ_04542 [Jatropha curcas]
7 Hb_008725_020 0.1017910307 - - PREDICTED: cytidine deaminase 1 [Jatropha curcas]
8 Hb_000991_080 0.1034500301 - - kinase, putative [Ricinus communis]
9 Hb_008352_020 0.1073825767 - - hypothetical protein [Cecembia lonarensis]
10 Hb_001562_030 0.1093471667 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH35 isoform X1 [Jatropha curcas]
11 Hb_003435_040 0.1106304162 - - tonoplast intrinsic protein [Hevea brasiliensis]
12 Hb_004634_030 0.1134616989 - - conserved hypothetical protein [Ricinus communis]
13 Hb_010642_010 0.1137343312 - - PREDICTED: aquaporin TIP2-1 [Jatropha curcas]
14 Hb_000714_070 0.1139011784 transcription factor TF Family: LOB hypothetical protein JCGZ_14754 [Jatropha curcas]
15 Hb_077694_020 0.1142694788 - - SAUR family protein [Theobroma cacao]
16 Hb_003427_020 0.1164665344 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g53440 isoform X1 [Jatropha curcas]
17 Hb_004324_100 0.1170620144 - - trehalose-6-phosphate synthase, putative [Ricinus communis]
18 Hb_122951_010 0.1180709461 - - PREDICTED: uncharacterized protein LOC105639235 [Jatropha curcas]
19 Hb_002804_070 0.1197287632 - - hypothetical protein JCGZ_05701 [Jatropha curcas]
20 Hb_000120_600 0.1198352115 - - PREDICTED: uncharacterized protein LOC105628582 [Jatropha curcas]

Gene co-expression network

sample Hb_153180_010 Hb_153180_010 Hb_030827_080 Hb_030827_080 Hb_153180_010--Hb_030827_080 Hb_002739_160 Hb_002739_160 Hb_153180_010--Hb_002739_160 Hb_001856_130 Hb_001856_130 Hb_153180_010--Hb_001856_130 Hb_001198_180 Hb_001198_180 Hb_153180_010--Hb_001198_180 Hb_002522_040 Hb_002522_040 Hb_153180_010--Hb_002522_040 Hb_008725_020 Hb_008725_020 Hb_153180_010--Hb_008725_020 Hb_030827_080--Hb_002739_160 Hb_010642_010 Hb_010642_010 Hb_030827_080--Hb_010642_010 Hb_008352_020 Hb_008352_020 Hb_030827_080--Hb_008352_020 Hb_030827_080--Hb_001198_180 Hb_001663_090 Hb_001663_090 Hb_030827_080--Hb_001663_090 Hb_002739_160--Hb_010642_010 Hb_002739_160--Hb_008352_020 Hb_002739_160--Hb_001198_180 Hb_002739_160--Hb_001663_090 Hb_000120_600 Hb_000120_600 Hb_001856_130--Hb_000120_600 Hb_001417_090 Hb_001417_090 Hb_001856_130--Hb_001417_090 Hb_120040_010 Hb_120040_010 Hb_001856_130--Hb_120040_010 Hb_001953_010 Hb_001953_010 Hb_001856_130--Hb_001953_010 Hb_000000_320 Hb_000000_320 Hb_001856_130--Hb_000000_320 Hb_001562_030 Hb_001562_030 Hb_001198_180--Hb_001562_030 Hb_002897_030 Hb_002897_030 Hb_001198_180--Hb_002897_030 Hb_011355_020 Hb_011355_020 Hb_001198_180--Hb_011355_020 Hb_001198_180--Hb_008725_020 Hb_092975_010 Hb_092975_010 Hb_002522_040--Hb_092975_010 Hb_122951_010 Hb_122951_010 Hb_002522_040--Hb_122951_010 Hb_004031_050 Hb_004031_050 Hb_002522_040--Hb_004031_050 Hb_001117_180 Hb_001117_180 Hb_002522_040--Hb_001117_180 Hb_178049_010 Hb_178049_010 Hb_002522_040--Hb_178049_010 Hb_002325_050 Hb_002325_050 Hb_008725_020--Hb_002325_050 Hb_003849_200 Hb_003849_200 Hb_008725_020--Hb_003849_200 Hb_008725_020--Hb_001562_030 Hb_001013_080 Hb_001013_080 Hb_008725_020--Hb_001013_080 Hb_000991_080 Hb_000991_080 Hb_008725_020--Hb_000991_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 13.2943 10.938 28.9731 0.0379116 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 2.91642 4.87689

CAGE analysis