Hb_153547_010

Information

Type -
Description -
Location Contig153547: 603-1439
Sequence    

Annotation

kegg
ID rcu:RCOM_0781720
description hypothetical protein
nr
ID XP_012071603.1
description PREDICTED: protein FLX-like 4 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L3W6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04107 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_153547_010 0.0 - - PREDICTED: protein FLX-like 4 [Jatropha curcas]
2 Hb_117950_020 0.0658774727 desease resistance Gene Name: NB-ARC PREDICTED: mitogen-activated protein kinase kinase kinase 1-like [Jatropha curcas]
3 Hb_000317_440 0.0709640979 - - PREDICTED: zinc finger CCCH domain-containing protein 13 isoform X2 [Jatropha curcas]
4 Hb_000631_150 0.0724377275 - - PREDICTED: RNA polymerase-associated protein LEO1 [Jatropha curcas]
5 Hb_004724_360 0.0745147833 - - OTU-like cysteine protease family protein [Populus trichocarpa]
6 Hb_005295_040 0.0752780205 - - PREDICTED: polyadenylate-binding protein RBP47-like [Jatropha curcas]
7 Hb_000318_140 0.0758426947 - - Kinase superfamily protein isoform 2 [Theobroma cacao]
8 Hb_054380_010 0.0768614098 - - -
9 Hb_000331_480 0.0779812984 transcription factor TF Family: GNAT PREDICTED: elongator complex protein 3 [Jatropha curcas]
10 Hb_000230_370 0.0812872938 transcription factor TF Family: FAR1 PREDICTED: protein FAR1-RELATED SEQUENCE 7-like isoform X1 [Jatropha curcas]
11 Hb_000805_310 0.0819777381 - - PREDICTED: pentatricopeptide repeat-containing protein At3g04760, chloroplastic [Jatropha curcas]
12 Hb_000327_310 0.0842364292 - - PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp3 [Jatropha curcas]
13 Hb_000035_400 0.0854093369 - - PREDICTED: lariat debranching enzyme-like [Citrus sinensis]
14 Hb_002725_070 0.0860522659 - - hypothetical protein PRUPE_ppa005949mg [Prunus persica]
15 Hb_001009_050 0.0866897787 - - PREDICTED: WD repeat-containing protein 74 isoform X2 [Jatropha curcas]
16 Hb_002883_010 0.0867223701 - - PREDICTED: putative methyltransferase NSUN6 isoform X1 [Jatropha curcas]
17 Hb_018663_020 0.087222224 - - PREDICTED: nuclear pore complex protein NUP1 isoform X2 [Jatropha curcas]
18 Hb_004032_350 0.0873790633 - - PREDICTED: splicing factor U2af small subunit B-like isoform X1 [Musa acuminata subsp. malaccensis]
19 Hb_000134_360 0.089857679 - - PREDICTED: protein gar2 [Jatropha curcas]
20 Hb_000291_120 0.0902081195 transcription factor TF Family: ARF PREDICTED: auxin response factor 17 [Jatropha curcas]

Gene co-expression network

sample Hb_153547_010 Hb_153547_010 Hb_117950_020 Hb_117950_020 Hb_153547_010--Hb_117950_020 Hb_000317_440 Hb_000317_440 Hb_153547_010--Hb_000317_440 Hb_000631_150 Hb_000631_150 Hb_153547_010--Hb_000631_150 Hb_004724_360 Hb_004724_360 Hb_153547_010--Hb_004724_360 Hb_005295_040 Hb_005295_040 Hb_153547_010--Hb_005295_040 Hb_000318_140 Hb_000318_140 Hb_153547_010--Hb_000318_140 Hb_000078_100 Hb_000078_100 Hb_117950_020--Hb_000078_100 Hb_002725_070 Hb_002725_070 Hb_117950_020--Hb_002725_070 Hb_117950_020--Hb_000317_440 Hb_117950_020--Hb_000631_150 Hb_001431_070 Hb_001431_070 Hb_117950_020--Hb_001431_070 Hb_000317_440--Hb_000631_150 Hb_001437_100 Hb_001437_100 Hb_000317_440--Hb_001437_100 Hb_000136_150 Hb_000136_150 Hb_000317_440--Hb_000136_150 Hb_002883_010 Hb_002883_010 Hb_000317_440--Hb_002883_010 Hb_016657_020 Hb_016657_020 Hb_000317_440--Hb_016657_020 Hb_000134_360 Hb_000134_360 Hb_000631_150--Hb_000134_360 Hb_000849_100 Hb_000849_100 Hb_000631_150--Hb_000849_100 Hb_004608_020 Hb_004608_020 Hb_000631_150--Hb_004608_020 Hb_000631_150--Hb_000318_140 Hb_031754_010 Hb_031754_010 Hb_000631_150--Hb_031754_010 Hb_000076_080 Hb_000076_080 Hb_004724_360--Hb_000076_080 Hb_000327_310 Hb_000327_310 Hb_004724_360--Hb_000327_310 Hb_001504_160 Hb_001504_160 Hb_004724_360--Hb_001504_160 Hb_000684_420 Hb_000684_420 Hb_004724_360--Hb_000684_420 Hb_000001_180 Hb_000001_180 Hb_004724_360--Hb_000001_180 Hb_004724_360--Hb_005295_040 Hb_005295_040--Hb_002725_070 Hb_001975_020 Hb_001975_020 Hb_005295_040--Hb_001975_020 Hb_000367_290 Hb_000367_290 Hb_005295_040--Hb_000367_290 Hb_005635_010 Hb_005635_010 Hb_005295_040--Hb_005635_010 Hb_005295_040--Hb_000327_310 Hb_025557_020 Hb_025557_020 Hb_000318_140--Hb_025557_020 Hb_002820_040 Hb_002820_040 Hb_000318_140--Hb_002820_040 Hb_018663_020 Hb_018663_020 Hb_000318_140--Hb_018663_020 Hb_000035_400 Hb_000035_400 Hb_000318_140--Hb_000035_400 Hb_009615_110 Hb_009615_110 Hb_000318_140--Hb_009615_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
172.977 57.4827 18.2257 13.5807 185.382 175.434
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
68.6586 40.7317 51.1716 61.22 27.8009

CAGE analysis