Hb_153558_010

Information

Type -
Description -
Location Contig153558: 1-750
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa001143mg
description hypothetical protein
nr
ID XP_007214612.1
description hypothetical protein PRUPE_ppa001143mg [Prunus persica]
swissprot
ID Q9SU29
description E3 ubiquitin-protein ligase UPL5 OS=Arabidopsis thaliana GN=UPL5 PE=1 SV=1
trembl
ID M5WRG4
description Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001143mg PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_153558_010 0.0 - - hypothetical protein PRUPE_ppa001143mg [Prunus persica]
2 Hb_005730_080 0.1946534227 - - PREDICTED: 17.6 kDa class I heat shock protein-like [Solanum lycopersicum]
3 Hb_000345_120 0.2611634599 - - PREDICTED: mediator of RNA polymerase II transcription subunit 37a [Jatropha curcas]
4 Hb_002260_190 0.2662042917 - - -
5 Hb_002022_050 0.2669126024 - - PREDICTED: O-acyltransferase WSD1-like isoform X1 [Populus euphratica]
6 Hb_002232_200 0.2687148665 - - PREDICTED: sugar carrier protein C-like [Jatropha curcas]
7 Hb_003462_010 0.2688165458 - - WD-repeat protein, putative [Ricinus communis]
8 Hb_002595_100 0.2737452934 - - heat-shock protein, putative [Ricinus communis]
9 Hb_000005_040 0.2739122369 - - PREDICTED: histone H2B.2 [Jatropha curcas]
10 Hb_002900_060 0.2797279139 - - CI small heat shock protein 2 [Prunus salicina]
11 Hb_000227_420 0.280197051 - - PREDICTED: thermospermine synthase ACAULIS5-like [Jatropha curcas]
12 Hb_043629_020 0.287830932 - - hypothetical protein POPTR_0009s13360g [Populus trichocarpa]
13 Hb_027751_050 0.2922155555 - - hypothetical protein JCGZ_05887 [Jatropha curcas]
14 Hb_013394_090 0.2939680596 - - conserved hypothetical protein [Ricinus communis]
15 Hb_001142_020 0.2977265013 - - -
16 Hb_000115_170 0.298039231 - - hypothetical protein JCGZ_18339 [Jatropha curcas]
17 Hb_155911_010 0.3002816672 - - hypothetical protein JCGZ_26951 [Jatropha curcas]
18 Hb_000362_230 0.3058155063 - - UDP-glucosyltransferase, putative [Ricinus communis]
19 Hb_002073_070 0.3113865787 - - PREDICTED: 17.3 kDa class I heat shock protein-like [Jatropha curcas]
20 Hb_079543_010 0.3131700028 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]

Gene co-expression network

sample Hb_153558_010 Hb_153558_010 Hb_005730_080 Hb_005730_080 Hb_153558_010--Hb_005730_080 Hb_000345_120 Hb_000345_120 Hb_153558_010--Hb_000345_120 Hb_002260_190 Hb_002260_190 Hb_153558_010--Hb_002260_190 Hb_002022_050 Hb_002022_050 Hb_153558_010--Hb_002022_050 Hb_002232_200 Hb_002232_200 Hb_153558_010--Hb_002232_200 Hb_003462_010 Hb_003462_010 Hb_153558_010--Hb_003462_010 Hb_000005_040 Hb_000005_040 Hb_005730_080--Hb_000005_040 Hb_005730_080--Hb_002232_200 Hb_002900_060 Hb_002900_060 Hb_005730_080--Hb_002900_060 Hb_005730_080--Hb_002260_190 Hb_005730_080--Hb_002022_050 Hb_002595_100 Hb_002595_100 Hb_005730_080--Hb_002595_100 Hb_002890_190 Hb_002890_190 Hb_000345_120--Hb_002890_190 Hb_000424_160 Hb_000424_160 Hb_000345_120--Hb_000424_160 Hb_000345_120--Hb_003462_010 Hb_000345_120--Hb_005730_080 Hb_027751_050 Hb_027751_050 Hb_000345_120--Hb_027751_050 Hb_002260_190--Hb_002022_050 Hb_002260_190--Hb_000005_040 Hb_002260_190--Hb_002595_100 Hb_002260_190--Hb_002900_060 Hb_001142_020 Hb_001142_020 Hb_002260_190--Hb_001142_020 Hb_155911_010 Hb_155911_010 Hb_002260_190--Hb_155911_010 Hb_002022_050--Hb_000005_040 Hb_002022_050--Hb_002595_100 Hb_002022_050--Hb_001142_020 Hb_002022_050--Hb_002900_060 Hb_002022_050--Hb_155911_010 Hb_002232_200--Hb_000005_040 Hb_002232_200--Hb_002900_060 Hb_002232_200--Hb_002022_050 Hb_002232_200--Hb_002260_190 Hb_002232_200--Hb_001142_020 Hb_043629_020 Hb_043629_020 Hb_003462_010--Hb_043629_020 Hb_000115_170 Hb_000115_170 Hb_003462_010--Hb_000115_170 Hb_000227_420 Hb_000227_420 Hb_003462_010--Hb_000227_420 Hb_003462_010--Hb_002232_200 Hb_003462_010--Hb_027751_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 2.93664 0.365955
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.144936 0.205314 0.160304

CAGE analysis