Hb_154038_010

Information

Type -
Description -
Location Contig154038: 5736-13639
Sequence    

Annotation

kegg
ID rcu:RCOM_0787730
description cytochrome P450, putative (EC:1.14.13.87)
nr
ID XP_002531103.1
description cytochrome P450, putative [Ricinus communis]
swissprot
ID P93149
description Licodione synthase OS=Glycyrrhiza echinata GN=CYP93B1 PE=1 SV=2
trembl
ID B9SYN4
description Cytochrome P450, putative OS=Ricinus communis GN=RCOM_0787730 PE=3 SV=1
Gene Ontology
ID GO:0005506
description licodione synthase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_154038_010 0.0 - - cytochrome P450, putative [Ricinus communis]
2 Hb_006483_040 0.0182863948 - - PREDICTED: uncharacterized protein LOC105639715 [Jatropha curcas]
3 Hb_008453_050 0.0225785415 - - PREDICTED: peroxidase 64 [Jatropha curcas]
4 Hb_064445_020 0.0273860507 - - PREDICTED: serine carboxypeptidase-like 34 [Populus euphratica]
5 Hb_072771_010 0.0300192918 - - Endo-1,4-beta-xylanase C precursor, putative [Ricinus communis]
6 Hb_001345_050 0.0310372227 - - hypothetical protein POPTR_0014s14480g [Populus trichocarpa]
7 Hb_002326_010 0.0311953784 transcription factor TF Family: G2-like hypothetical protein RCOM_1592640 [Ricinus communis]
8 Hb_001593_040 0.0407490682 - - PREDICTED: secoisolariciresinol dehydrogenase-like [Jatropha curcas]
9 Hb_000224_190 0.0461135225 - - zinc finger protein, putative [Ricinus communis]
10 Hb_001472_150 0.0487499796 - - PREDICTED: cytochrome P450 86A7 [Jatropha curcas]
11 Hb_005839_040 0.0499803329 - - hypothetical protein POPTR_0019s08420g [Populus trichocarpa]
12 Hb_001232_070 0.0547490431 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000329_120 0.0593633879 - - 21 kDa protein precursor, putative [Ricinus communis]
14 Hb_002391_340 0.0611781833 - - RNA polymerase II largest subunit [Liriodendron tulipifera]
15 Hb_001863_470 0.061877932 - - PREDICTED: uncharacterized protein LOC105630613 [Jatropha curcas]
16 Hb_001926_080 0.0660218237 - - PREDICTED: uncharacterized protein LOC103454919 [Malus domestica]
17 Hb_012098_120 0.0709780202 - - PREDICTED: putative elongation of fatty acids protein DDB_G0272012 [Jatropha curcas]
18 Hb_004807_010 0.0720064582 - - PREDICTED: auxin-induced protein 15A-like [Jatropha curcas]
19 Hb_000077_040 0.0744560909 - - PREDICTED: O-acyltransferase WSD1-like [Jatropha curcas]
20 Hb_002391_010 0.0761288448 - - PREDICTED: probable acyl-activating enzyme 1, peroxisomal [Jatropha curcas]

Gene co-expression network

sample Hb_154038_010 Hb_154038_010 Hb_006483_040 Hb_006483_040 Hb_154038_010--Hb_006483_040 Hb_008453_050 Hb_008453_050 Hb_154038_010--Hb_008453_050 Hb_064445_020 Hb_064445_020 Hb_154038_010--Hb_064445_020 Hb_072771_010 Hb_072771_010 Hb_154038_010--Hb_072771_010 Hb_001345_050 Hb_001345_050 Hb_154038_010--Hb_001345_050 Hb_002326_010 Hb_002326_010 Hb_154038_010--Hb_002326_010 Hb_006483_040--Hb_064445_020 Hb_006483_040--Hb_008453_050 Hb_001232_070 Hb_001232_070 Hb_006483_040--Hb_001232_070 Hb_001472_150 Hb_001472_150 Hb_006483_040--Hb_001472_150 Hb_002391_340 Hb_002391_340 Hb_006483_040--Hb_002391_340 Hb_008453_050--Hb_002326_010 Hb_008453_050--Hb_064445_020 Hb_008453_050--Hb_072771_010 Hb_008453_050--Hb_001345_050 Hb_001593_040 Hb_001593_040 Hb_064445_020--Hb_001593_040 Hb_064445_020--Hb_002326_010 Hb_000224_190 Hb_000224_190 Hb_064445_020--Hb_000224_190 Hb_072771_010--Hb_001345_050 Hb_072771_010--Hb_000224_190 Hb_072771_010--Hb_002326_010 Hb_001926_080 Hb_001926_080 Hb_072771_010--Hb_001926_080 Hb_001345_050--Hb_000224_190 Hb_001345_050--Hb_002326_010 Hb_001345_050--Hb_001926_080 Hb_002326_010--Hb_000224_190 Hb_002326_010--Hb_001593_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.923958 1.69612 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 2.60219

CAGE analysis