Hb_154648_010

Information

Type -
Description -
Location Contig154648: 241-762
Sequence    

Annotation

kegg
ID rcu:RCOM_0158420
description hypothetical protein
nr
ID XP_012072662.1
description PREDICTED: uncharacterized protein LOC105634412 isoform X2 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KS65
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06725 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_154648_010 0.0 - - PREDICTED: uncharacterized protein LOC105634412 isoform X2 [Jatropha curcas]
2 Hb_000000_250 0.060443711 - - PREDICTED: putative pentatricopeptide repeat-containing protein At1g19290 [Jatropha curcas]
3 Hb_006922_110 0.0709675965 - - PREDICTED: probable VAMP-like protein At1g33475 [Jatropha curcas]
4 Hb_003996_020 0.0740778847 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
5 Hb_004976_030 0.0750706278 - - hypothetical protein POPTR_0005s04700g [Populus trichocarpa]
6 Hb_003018_190 0.0808440167 - - PREDICTED: pentatricopeptide repeat-containing protein At4g31070, mitochondrial [Jatropha curcas]
7 Hb_006816_140 0.0850819392 - - PREDICTED: pentatricopeptide repeat-containing protein At1g09820 [Jatropha curcas]
8 Hb_005625_020 0.0853686652 transcription factor TF Family: bZIP PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1 [Jatropha curcas]
9 Hb_004109_190 0.0864508323 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 25-like isoform X2 [Populus euphratica]
10 Hb_000200_050 0.0906612946 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
11 Hb_005289_030 0.0936085095 - - PREDICTED: receptor homology region, transmembrane domain- and RING domain-containing protein 2 [Jatropha curcas]
12 Hb_000205_270 0.0940405278 - - PREDICTED: uncharacterized protein LOC105632722 isoform X1 [Jatropha curcas]
13 Hb_010436_060 0.0952794755 - - hypothetical protein CISIN_1g0003801mg, partial [Citrus sinensis]
14 Hb_016065_010 0.096145316 - - PREDICTED: pentatricopeptide repeat-containing protein At5g08305 [Jatropha curcas]
15 Hb_009666_040 0.0973282287 - - glutathione transferase, putative [Ricinus communis]
16 Hb_183086_060 0.097609918 desease resistance Gene Name: AAA PREDICTED: ATPase family AAA domain-containing protein 1-B [Jatropha curcas]
17 Hb_001242_110 0.0977730545 - - 40S ribosomal protein S18, putative [Ricinus communis]
18 Hb_006117_070 0.0983099179 - - PREDICTED: uncharacterized protein LOC105639569 isoform X2 [Jatropha curcas]
19 Hb_000086_400 0.0984994175 - - calmodulin binding protein, putative [Ricinus communis]
20 Hb_003266_130 0.0986059609 - - PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Jatropha curcas]

Gene co-expression network

sample Hb_154648_010 Hb_154648_010 Hb_000000_250 Hb_000000_250 Hb_154648_010--Hb_000000_250 Hb_006922_110 Hb_006922_110 Hb_154648_010--Hb_006922_110 Hb_003996_020 Hb_003996_020 Hb_154648_010--Hb_003996_020 Hb_004976_030 Hb_004976_030 Hb_154648_010--Hb_004976_030 Hb_003018_190 Hb_003018_190 Hb_154648_010--Hb_003018_190 Hb_006816_140 Hb_006816_140 Hb_154648_010--Hb_006816_140 Hb_000086_400 Hb_000086_400 Hb_000000_250--Hb_000086_400 Hb_000000_250--Hb_006922_110 Hb_001898_220 Hb_001898_220 Hb_000000_250--Hb_001898_220 Hb_189003_080 Hb_189003_080 Hb_000000_250--Hb_189003_080 Hb_000000_250--Hb_003996_020 Hb_006922_110--Hb_003996_020 Hb_029584_130 Hb_029584_130 Hb_006922_110--Hb_029584_130 Hb_000200_050 Hb_000200_050 Hb_006922_110--Hb_000200_050 Hb_003266_130 Hb_003266_130 Hb_006922_110--Hb_003266_130 Hb_002759_060 Hb_002759_060 Hb_003996_020--Hb_002759_060 Hb_061090_010 Hb_061090_010 Hb_003996_020--Hb_061090_010 Hb_001242_110 Hb_001242_110 Hb_003996_020--Hb_001242_110 Hb_033834_040 Hb_033834_040 Hb_003996_020--Hb_033834_040 Hb_000207_250 Hb_000207_250 Hb_004976_030--Hb_000207_250 Hb_004976_030--Hb_000200_050 Hb_004976_030--Hb_000000_250 Hb_004976_030--Hb_003996_020 Hb_004109_190 Hb_004109_190 Hb_004976_030--Hb_004109_190 Hb_131864_040 Hb_131864_040 Hb_003018_190--Hb_131864_040 Hb_000997_400 Hb_000997_400 Hb_003018_190--Hb_000997_400 Hb_002603_160 Hb_002603_160 Hb_003018_190--Hb_002603_160 Hb_001141_280 Hb_001141_280 Hb_003018_190--Hb_001141_280 Hb_005488_010 Hb_005488_010 Hb_003018_190--Hb_005488_010 Hb_006846_110 Hb_006846_110 Hb_003018_190--Hb_006846_110 Hb_001158_140 Hb_001158_140 Hb_006816_140--Hb_001158_140 Hb_006816_140--Hb_000200_050 Hb_006816_140--Hb_003266_130 Hb_016901_010 Hb_016901_010 Hb_006816_140--Hb_016901_010 Hb_006816_140--Hb_000997_400 Hb_000614_230 Hb_000614_230 Hb_006816_140--Hb_000614_230
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
53.5776 29.7563 19.224 40.793 49.9043 117.962
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
71.4679 105.713 139.287 39.7889 34.6966

CAGE analysis