Hb_155150_010

Information

Type -
Description -
Location Contig155150: 46-996
Sequence    

Annotation

kegg
ID rcu:RCOM_0917390
description kinase, putative (EC:2.7.11.25)
nr
ID XP_002530995.1
description kinase, putative [Ricinus communis]
swissprot
ID Q9SCZ4
description Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana GN=FER PE=1 SV=1
trembl
ID B9SYC6
description Kinase, putative OS=Ricinus communis GN=RCOM_0917390 PE=3 SV=1
Gene Ontology
ID GO:0004672
description receptor-like protein kinase feronia

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_155150_010 0.0 - - kinase, putative [Ricinus communis]
2 Hb_000757_020 0.1089183893 - - PREDICTED: multiple C2 and transmembrane domain-containing protein 2 [Jatropha curcas]
3 Hb_001446_060 0.1132450761 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
4 Hb_029748_020 0.1140610759 - - PREDICTED: ent-kaur-16-ene synthase, chloroplastic isoform X1 [Jatropha curcas]
5 Hb_001898_020 0.1336420113 - - PREDICTED: uncharacterized protein LOC105629659 [Jatropha curcas]
6 Hb_000321_120 0.1353768406 - - PREDICTED: probable receptor-like protein kinase At5g59700 [Jatropha curcas]
7 Hb_000438_020 0.1386991574 - - leucine-rich repeat-containing protein 2, lrrc2, putative [Ricinus communis]
8 Hb_000418_150 0.1437980423 - - ABC transporter family protein [Hevea brasiliensis]
9 Hb_052117_010 0.146556734 - - kinase, putative [Ricinus communis]
10 Hb_001391_100 0.1468937261 - - AMP dependent ligase, putative [Ricinus communis]
11 Hb_002099_060 0.1470692426 - - Protein AFR, putative [Ricinus communis]
12 Hb_001430_100 0.14742444 - - cytochrome P450, putative [Ricinus communis]
13 Hb_049293_010 0.1477456217 - - kinase, putative [Ricinus communis]
14 Hb_062229_010 0.1493223175 - - hypothetical protein POPTR_0013s02830g [Populus trichocarpa]
15 Hb_003177_090 0.1505032762 - - PREDICTED: filament-like plant protein 4 [Jatropha curcas]
16 Hb_146510_010 0.1515985195 - - cinnamyl alcohol dehydrogenase [Hevea brasiliensis]
17 Hb_005155_010 0.1520696765 - - amino acid transporter, putative [Ricinus communis]
18 Hb_061908_020 0.1538481117 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance RPP13-like protein 1 [Jatropha curcas]
19 Hb_000221_180 0.1552868677 - - VQ motif-containing family protein [Populus trichocarpa]
20 Hb_036568_010 0.1563521551 transcription factor TF Family: GRAS PREDICTED: scarecrow-like protein 23 [Jatropha curcas]

Gene co-expression network

sample Hb_155150_010 Hb_155150_010 Hb_000757_020 Hb_000757_020 Hb_155150_010--Hb_000757_020 Hb_001446_060 Hb_001446_060 Hb_155150_010--Hb_001446_060 Hb_029748_020 Hb_029748_020 Hb_155150_010--Hb_029748_020 Hb_001898_020 Hb_001898_020 Hb_155150_010--Hb_001898_020 Hb_000321_120 Hb_000321_120 Hb_155150_010--Hb_000321_120 Hb_000438_020 Hb_000438_020 Hb_155150_010--Hb_000438_020 Hb_049293_010 Hb_049293_010 Hb_000757_020--Hb_049293_010 Hb_003177_090 Hb_003177_090 Hb_000757_020--Hb_003177_090 Hb_000418_150 Hb_000418_150 Hb_000757_020--Hb_000418_150 Hb_000714_120 Hb_000714_120 Hb_000757_020--Hb_000714_120 Hb_000366_030 Hb_000366_030 Hb_000757_020--Hb_000366_030 Hb_001446_060--Hb_001898_020 Hb_005000_090 Hb_005000_090 Hb_001446_060--Hb_005000_090 Hb_001430_100 Hb_001430_100 Hb_001446_060--Hb_001430_100 Hb_102763_010 Hb_102763_010 Hb_001446_060--Hb_102763_010 Hb_000492_080 Hb_000492_080 Hb_001446_060--Hb_000492_080 Hb_000100_210 Hb_000100_210 Hb_029748_020--Hb_000100_210 Hb_029748_020--Hb_000321_120 Hb_001522_040 Hb_001522_040 Hb_029748_020--Hb_001522_040 Hb_002099_060 Hb_002099_060 Hb_029748_020--Hb_002099_060 Hb_029748_020--Hb_000438_020 Hb_052117_010 Hb_052117_010 Hb_001898_020--Hb_052117_010 Hb_001898_020--Hb_001522_040 Hb_009745_010 Hb_009745_010 Hb_001898_020--Hb_009745_010 Hb_000950_040 Hb_000950_040 Hb_001898_020--Hb_000950_040 Hb_005016_020 Hb_005016_020 Hb_001898_020--Hb_005016_020 Hb_000340_360 Hb_000340_360 Hb_000321_120--Hb_000340_360 Hb_000221_180 Hb_000221_180 Hb_000321_120--Hb_000221_180 Hb_000175_270 Hb_000175_270 Hb_000321_120--Hb_000175_270 Hb_013399_090 Hb_013399_090 Hb_000321_120--Hb_013399_090 Hb_001269_050 Hb_001269_050 Hb_000321_120--Hb_001269_050 Hb_000438_020--Hb_002099_060 Hb_000438_020--Hb_000418_150 Hb_000438_020--Hb_003177_090 Hb_001307_200 Hb_001307_200 Hb_000438_020--Hb_001307_200 Hb_001689_030 Hb_001689_030 Hb_000438_020--Hb_001689_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.24884 7.92937 1.89045 6.49965 0.740803 1.26225
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.387029 0.0434822 0.318605 4.50194 7.61011

CAGE analysis