Hb_155423_010

Information

Type -
Description -
Location Contig155423: 2099-3097
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_155423_010 0.0 - - -
2 Hb_002631_270 0.0868232343 transcription factor TF Family: MYB hypothetical protein POPTR_0005s09930g [Populus trichocarpa]
3 Hb_003994_070 0.0937702376 - - Anthranilate N-benzoyltransferase protein, putative [Ricinus communis]
4 Hb_009851_090 0.0987778123 - - Protein ABIL2, putative [Ricinus communis]
5 Hb_002447_100 0.1002412751 - - hypothetical protein POPTR_0009s06260g [Populus trichocarpa]
6 Hb_151870_010 0.1108127654 - - Metalloendoproteinase 1 precursor, putative [Ricinus communis]
7 Hb_000567_270 0.1212260898 - - hypothetical protein L484_017162 [Morus notabilis]
8 Hb_003311_020 0.1222486839 - - conserved hypothetical protein [Ricinus communis]
9 Hb_006807_010 0.1243077323 - - hypothetical protein JCGZ_20881 [Jatropha curcas]
10 Hb_017225_030 0.1287537916 - - PREDICTED: probable cytosolic oligopeptidase A [Jatropha curcas]
11 Hb_032016_010 0.1390191473 - - PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At3g28040-like isoform X1 [Citrus sinensis]
12 Hb_005920_030 0.1452634939 - - putative polyprotein [Oryza sativa Japonica Group]
13 Hb_000260_730 0.14770562 - - -
14 Hb_000169_100 0.1478263082 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Fragaria vesca subsp. vesca]
15 Hb_008834_010 0.1496569962 - - hypothetical protein POPTR_0016s04660g [Populus trichocarpa]
16 Hb_000968_070 0.1601170128 - - -
17 Hb_029727_010 0.1612058431 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
18 Hb_000644_020 0.1655634512 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA1 [Jatropha curcas]
19 Hb_004312_020 0.1682924032 - - conserved hypothetical protein [Ricinus communis]
20 Hb_001355_060 0.1697313713 - - PREDICTED: uncharacterized protein LOC105160092 [Sesamum indicum]

Gene co-expression network

sample Hb_155423_010 Hb_155423_010 Hb_002631_270 Hb_002631_270 Hb_155423_010--Hb_002631_270 Hb_003994_070 Hb_003994_070 Hb_155423_010--Hb_003994_070 Hb_009851_090 Hb_009851_090 Hb_155423_010--Hb_009851_090 Hb_002447_100 Hb_002447_100 Hb_155423_010--Hb_002447_100 Hb_151870_010 Hb_151870_010 Hb_155423_010--Hb_151870_010 Hb_000567_270 Hb_000567_270 Hb_155423_010--Hb_000567_270 Hb_002631_270--Hb_151870_010 Hb_017225_030 Hb_017225_030 Hb_002631_270--Hb_017225_030 Hb_002631_270--Hb_009851_090 Hb_006807_010 Hb_006807_010 Hb_002631_270--Hb_006807_010 Hb_029727_010 Hb_029727_010 Hb_002631_270--Hb_029727_010 Hb_003994_070--Hb_009851_090 Hb_003311_020 Hb_003311_020 Hb_003994_070--Hb_003311_020 Hb_035651_010 Hb_035651_010 Hb_003994_070--Hb_035651_010 Hb_005920_030 Hb_005920_030 Hb_003994_070--Hb_005920_030 Hb_001250_030 Hb_001250_030 Hb_003994_070--Hb_001250_030 Hb_032016_010 Hb_032016_010 Hb_009851_090--Hb_032016_010 Hb_009851_090--Hb_003311_020 Hb_009851_090--Hb_000567_270 Hb_007590_030 Hb_007590_030 Hb_002447_100--Hb_007590_030 Hb_112791_030 Hb_112791_030 Hb_002447_100--Hb_112791_030 Hb_001542_010 Hb_001542_010 Hb_002447_100--Hb_001542_010 Hb_145080_010 Hb_145080_010 Hb_002447_100--Hb_145080_010 Hb_011358_010 Hb_011358_010 Hb_002447_100--Hb_011358_010 Hb_151870_010--Hb_006807_010 Hb_151870_010--Hb_017225_030 Hb_151870_010--Hb_009851_090 Hb_102761_010 Hb_102761_010 Hb_151870_010--Hb_102761_010 Hb_000567_270--Hb_003311_020 Hb_000567_270--Hb_032016_010 Hb_007533_050 Hb_007533_050 Hb_000567_270--Hb_007533_050 Hb_000644_020 Hb_000644_020 Hb_000567_270--Hb_000644_020 Hb_006455_020 Hb_006455_020 Hb_000567_270--Hb_006455_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.237881 0.0437196 0.364196 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.487137 1.85049

CAGE analysis